DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dock and lck

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001001596.1 Gene:lck / 414333 ZFINID:ZDB-GENE-040617-1 Length:503 Species:Danio rerio


Alignment Length:236 Identity:63/236 - (26%)
Similarity:101/236 - (42%) Gaps:84/236 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 FPSNYTTEDCDNDGEIHTYAMAENVLDIVVALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYK 365
            :||.||...        :..:.||   :|||:|.:...:..:|.||||::::|:|  ..||:||.
Zfish    41 YPSQYTPPP--------SSPLPEN---LVVAIYKYDPAHSDDLGFEKGEKMKILD--CDDPEWYM 92

  Fly   366 ARN-NQGQVGLVPRNYLQELNDYLATPYRNASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKP 429
            |.: ..||.|.:|:|::.:||                                 |||.       
Zfish    93 AESLFTGQRGYIPKNFVAKLN---------------------------------SMET------- 117

  Fly   430 AAQSSGQPIERPNLAGKSWYYGAITRSQCDTVLNGHGH-DGDFLIRDSETNMGDYSVSLK--APG 491
                            :.|:|..::|:.....|...|: .|.||||:|||..|.:|:|::  .|.
Zfish   118 ----------------EPWFYKNLSRNDAMRQLLAPGNTQGSFLIRESETQPGSFSISVRDLDPM 166

  Fly   492 RN---KHFRVHVEQNM-----YCIGQRKFHSLDQLVDHYQR 524
            :.   ||:|:   :||     |...:..|:||.:||.||.|
Zfish   167 QGDIIKHYRI---RNMDAGGFYITNKISFNSLSELVKHYSR 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700 4/6 (67%)
SH3_Nck_3 328..383 CDD:212701 21/55 (38%)
SH2_Nck_family 446..538 CDD:198196 31/90 (34%)
lckNP_001001596.1 SH3_Lck 57..111 CDD:212938 21/55 (38%)
SH2_Src_Lck 116..216 CDD:198225 32/115 (28%)
PTKc_Lck_Blk 230..493 CDD:270652
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.