DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and grb2b

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_998200.1 Gene:grb2b / 406308 ZFINID:ZDB-GENE-040426-1975 Length:217 Species:Danio rerio


Alignment Length:204 Identity:54/204 - (26%)
Similarity:93/204 - (45%) Gaps:63/204 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 VALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQGQVGLVPRNYLQELNDYLATPYRN 394
            :|.|.|.:..|.||||::|:.|::::... |.:||||..| |:.|.:|:||::            
Zfish     4 IAKYDFKATADDELSFKRGEILKVLNEEC-DQNWYKAELN-GKDGFIPKNYIE------------ 54

  Fly   395 ASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNLAGKSWYYGAITRSQCD 459
                                                            :....|::|.|.|::.:
Zfish    55 ------------------------------------------------MKAHPWFFGRIPRARAE 71

  Fly   460 TVLNGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRVHVE-QNMYCIGQRKFHSLDQLVDHYQ 523
            .:||...|||.||||:||:..||:|:|:|.....:||:|..: ...|.:...||:||::|||:::
Zfish    72 EILNKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHR 136

  Fly   524 RAPIYTNKQ 532
            ...:..|:|
Zfish   137 TTSVSRNQQ 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701 21/52 (40%)
SH2_Nck_family 446..538 CDD:198196 33/88 (38%)
grb2bNP_998200.1 SH3_GRB2_N 1..56 CDD:212879 21/113 (19%)
SH2_Grb2_like 56..150 CDD:199828 33/90 (37%)
SH3_GRB2_C 160..212 CDD:212882
Blue background indicates that the domain is not in the aligned region.

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