DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and syk

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_005155595.1 Gene:syk / 405769 ZFINID:ZDB-GENE-040702-3 Length:608 Species:Danio rerio


Alignment Length:109 Identity:30/109 - (27%)
Similarity:50/109 - (45%) Gaps:18/109 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   448 WYYGAITRSQCDTVL-NGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRVHVEQN-MYCIGQR 510
            :::|.|||.:.:..| .|...||.:|:|.|.:.:|.|::||....:..|:.:..|.| .|.|...
Zfish    10 YFFGNITREESEVYLQQGGSGDGLYLLRQSRSFLGGYALSLSYGRQFYHYTIERELNDTYAIAGG 74

  Fly   511 KFHSLDQLVDHYQRAPI----YTNKQGEKLYLVRSLP--KANGT 548
            |.|          |.||    |.:::.:.|..:...|  :..||
Zfish    75 KSH----------RTPIDVINYHSQESDGLICLLKKPFHRPRGT 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701
SH2_Nck_family 446..538 CDD:198196 27/95 (28%)
sykXP_005155595.1 SH2_N-SH2_Zap70_Syk_like 8..111 CDD:198191 30/109 (28%)
SH2_C-SH2_Syk_like 159..260 CDD:198264
PTKc_Syk 348..604 CDD:133247
Blue background indicates that the domain is not in the aligned region.

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