DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and yrk

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001352482.1 Gene:yrk / 337571 ZFINID:ZDB-GENE-030131-9517 Length:528 Species:Danio rerio


Alignment Length:328 Identity:72/328 - (21%)
Similarity:122/328 - (37%) Gaps:130/328 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 KKGSGSKTLPN---C---------SPSRQVESPTMSRRLPPDPAEAIGTAVVKYNYQAQQPDELS 272
            |:...||.:.|   |         .|||.:..||.:..:|            .:| ....|    
Zfish     7 KQRKASKAVSNQNSCDAFNGTQASEPSRYIPDPTFNSGIP------------NFN-DFSNP---- 54

  Fly   273 LTKGTRILILEKSNDGWWRGQSGNSVGWFPSNYTTEDCDNDGEIHTYAMAENVLDIVVALYSFTS 337
            ||..|.|:     |.....|.:|..|..|                            :|||.:.:
Zfish    55 LTPPTSII-----NPARPPGLTGGGVTLF----------------------------IALYEYDA 86

  Fly   338 NNDQELSFEKGDRLEIVDRPASDPDWYKARN-NQGQVGLVPRNYLQELNDYLATPYRNASASAGN 401
            ..:.:|||:||::..|::.  ::.||::||: :.|:.|.:|.||:                    
Zfish    87 RTEDDLSFQKGEKFHIINN--TEGDWWEARSLDTGKSGYIPSNYV-------------------- 129

  Fly   402 GNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNLAGKSWYYGAITRSQCDTVLNGHG 466
                                              .|::  ::..:.||:|.:.|...:..|....
Zfish   130 ----------------------------------APVD--SIQAEEWYFGKMGRKDAERQLLAQN 158

  Fly   467 HD-GDFLIRDSETNMGDYSVSLK----APGRN-KHFRVHVEQN--MYCIGQRKFHSLDQLVDHY- 522
            :. |.||||:|||..|.||:|::    |.|.: ||:::....|  .|...:.:|.::.|||:|| 
Zfish   159 NPRGTFLIRESETTKGAYSLSIRDWDDAKGDHVKHYKIRKLDNGGYYITTRTQFDTVQQLVEHYT 223

  Fly   523 QRA 525
            :||
Zfish   224 ERA 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700 11/51 (22%)
SH3_Nck_3 328..383 CDD:212701 18/55 (33%)
SH2_Nck_family 446..538 CDD:198196 31/89 (35%)
yrkNP_001352482.1 SH3 76..133 CDD:473055 20/140 (14%)
SH2 136..234 CDD:472789 31/91 (34%)
PTKc_Src_Fyn_like 266..513 CDD:271105
Blue background indicates that the domain is not in the aligned region.

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