DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and Lck

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_006238994.1 Gene:Lck / 313050 RGDID:2994 Length:520 Species:Rattus norvegicus


Alignment Length:224 Identity:51/224 - (22%)
Similarity:94/224 - (41%) Gaps:78/224 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 DIVVALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARN-NQGQVGLVPRNYLQELNDYLAT 390
            ::|:||:|:..::|.:|.||||::|.|:::..   :|:||:: ..||.|.:|.|::.:.|     
  Rat    75 NLVIALHSYEPSHDGDLGFEKGEQLRILEQSG---EWWKAQSLTTGQEGFIPFNFVAKAN----- 131

  Fly   391 PYRNASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNLAGKSWYYGAITR 455
                                                               :|..:.|::..::|
  Rat   132 ---------------------------------------------------SLEPEPWFFKNLSR 145

  Fly   456 SQCDTVLNGHGH-DGDFLIRDSETNMGDYSVSLKAPGRN-----KHFRV-HVEQNMYCIGQR-KF 512
            ...:..|...|: .|.||||:||:..|.:|:|::...:|     ||::: :::...:.|..| .|
  Rat   146 KDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITF 210

  Fly   513 HSLDQLVDHYQRA----------PIYTNK 531
            ..|..||.||..|          |..|.|
  Rat   211 PGLHDLVRHYTNASDGLCTKLSRPCQTQK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701 20/55 (36%)
SH2_Nck_family 446..538 CDD:198196 29/104 (28%)
LckXP_006238994.1 SH3_Lck 76..129 CDD:212938 20/55 (36%)
SH2_Src_Lck 134..234 CDD:198225 26/99 (26%)
PTKc_Lck_Blk 248..511 CDD:270652
Blue background indicates that the domain is not in the aligned region.

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