DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dock and Txk

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001019426.1 Gene:Txk / 305311 RGDID:1306481 Length:526 Species:Rattus norvegicus


Alignment Length:203 Identity:46/203 - (22%)
Similarity:79/203 - (38%) Gaps:65/203 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 VVALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQGQVGLVPRNYLQELNDYLATPYR 393
            |.|||.|.......|:.::.:...|::|  .||.|::||:..|..||:|.||:.|          
  Rat    86 VKALYDFLPREPCNLALKRAEEYLILER--CDPHWWRARDRLGNEGLIPSNYVTE---------- 138

  Fly   394 NASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNLAGKSWYYGAITRSQC 458
                                             |:           ..||....||:..|||.|.
  Rat   139 ---------------------------------NR-----------LTNLETYEWYHKNITRDQT 159

  Fly   459 DTVLNGHGHDGDFLIRDSETNMGDYSVSLKAPGRN------KHFRVHVEQN--MYCIGQRKFHSL 515
            :.:|.....:|.|::|||. ::|.|::|:....|.      ||:::....:  .|...:..|.|:
  Rat   160 ERLLRQEAKEGAFIVRDSR-HLGSYTISVFTRARRHTQSSIKHYQIKKNDSGQWYVTERHLFPSV 223

  Fly   516 DQLVDHYQ 523
            .:|:.::|
  Rat   224 PELIQYHQ 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701 19/53 (36%)
SH2_Nck_family 446..538 CDD:198196 23/86 (27%)
TxkNP_001019426.1 SH3_TXK 84..138 CDD:212840 19/53 (36%)
SH2_Tec_Txk 142..247 CDD:198261 25/91 (27%)
Protein Kinases, catalytic domain 265..520 CDD:473864
Blue background indicates that the domain is not in the aligned region.

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