DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and Syk

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_036890.2 Gene:Syk / 25155 RGDID:3796 Length:629 Species:Rattus norvegicus


Alignment Length:114 Identity:33/114 - (28%)
Similarity:56/114 - (49%) Gaps:27/114 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   435 GQPIERPNLAGK---------------SWYYGAITRSQCD-TVLNGHGHDGDFLIRDSETNMGDY 483
            ||.:|:..::.|               .|::|.|:|.:.: |||.|...:|.||||..:.| |.:
  Rat   139 GQALEQAIISQKPQLEKLIATTAHEKMPWFHGNISRDESEQTVLIGSKTNGKFLIRARDNN-GSF 202

  Fly   484 SVSLKAPGRNKHFRVHVEQNMYCIGQ------RKFHSLDQLVDHYQRAP 526
            ::.|...|:..|:|:..::.    |:      :||.:|.|||:||...|
  Rat   203 ALCLLHEGKVLHYRIDRDKT----GKLSIPEGKKFDTLWQLVEHYSYKP 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701
SH2_Nck_family 446..538 CDD:198196 30/103 (29%)
SykNP_036890.2 SH2_N-SH2_Zap70_Syk_like 12..115 CDD:198191
Interdomain A. /evidence=ECO:0000250 107..166 4/26 (15%)
SH2_C-SH2_Syk_like 163..261 CDD:198264 29/90 (32%)
Interdomain B. /evidence=ECO:0000250 259..364
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 289..330
PTKc_Syk 370..625 CDD:133247
Blue background indicates that the domain is not in the aligned region.

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