DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and abl-1

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_509778.2 Gene:abl-1 / 181261 WormBaseID:WBGene00000018 Length:1224 Species:Caenorhabditis elegans


Alignment Length:337 Identity:74/337 - (21%)
Similarity:138/337 - (40%) Gaps:113/337 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 VKKEKPSLFDSIKKKVKKGSGSKTL---PNCSPSRQVESPTMSRRLPPDPAEAIGTAVVKYNYQA 265
            |...|..:...:.:::::......|   |....|.|:..||.....||:                
 Worm    28 VASPKSEISSKLAEEIERSKSPLILEVSPRTPDSVQMFRPTFDTFRPPN---------------- 76

  Fly   266 QQPDELSLTKGTRILILEKSNDGWWRGQSGNSVGWFPSNYTTEDCDNDGEIHTY-AMAENVLDIV 329
               .:.|..:|:      :|.:......|.|||            :|..:::|. :.:.:...:.
 Worm    77 ---SDSSTFRGS------QSREDLVACSSMNSV------------NNVHDMNTVSSSSSSSAPLF 120

  Fly   330 VALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKAR---------NNQ---GQVGLVPRNYLQ 382
            ||||.|....:::||..|||::.|:....:: :|.:||         :||   |::|.||.|:: 
 Worm   121 VALYDFHGVGEEQLSLRKGDQVRILGYNKNN-EWCEARLYSTRKNDASNQRRLGEIGWVPSNFI- 183

  Fly   383 ELNDYLATPYRNASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNLAGKS 447
                   .||                         :|:::                       .:
 Worm   184 -------APY-------------------------NSLDK-----------------------YT 193

  Fly   448 WYYGAITRSQCDTVLNGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRVHVE--QNMYCIGQR 510
            ||:|.|:||..:.:| |.|..|.||:|:|||::|.|::|::..||..|:|::|:  :.|:...:.
 Worm   194 WYHGKISRSDSEAIL-GSGITGSFLVRESETSIGQYTISVRHDGRVFHYRINVDNTEKMFITQEV 257

  Fly   511 KFHSLDQLVDHY 522
            ||.:|.:||.|:
 Worm   258 KFRTLGELVHHH 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699 74/337 (22%)
SH3_Nck_2 256..308 CDD:212700 7/51 (14%)
SH3_Nck_3 328..383 CDD:212701 21/66 (32%)
SH2_Nck_family 446..538 CDD:198196 31/79 (39%)
abl-1NP_509778.2 SH3_Abl 119..185 CDD:212784 21/74 (28%)
SH2_ABL 190..283 CDD:198189 31/104 (30%)
PTKc_Abl 304..566 CDD:270645
FABD 1091..1224 CDD:197885
Blue background indicates that the domain is not in the aligned region.

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