DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dock and Nck2

DIOPT Version :9

Sequence 1:NP_001259845.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_035009.3 Gene:Nck2 / 17974 MGIID:1306821 Length:380 Species:Mus musculus


Alignment Length:428 Identity:185/428 - (43%)
Similarity:247/428 - (57%) Gaps:95/428 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 VVAKYDYAAQGAQELDLRKNERYLLLDDSKHWWRVQNSRNQSGYVPSNYVKKEKPSLFDSIKKKV 219
            |:||:||.||..||||:|||||..||||||.||||:|:.|::||||||||::         |..:
Mouse     7 VIAKWDYTAQQDQELDIRKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVER---------KNSL 62

  Fly   220 KKGSGSKTLPNC--------SPSRQVESPTMSRRLPPD---PAEAIGT---------AVVKYNYQ 264
            ||||..|.|.:.        .||.:..|||.|    .|   ||...|.         |.||:.|.
Mouse    63 KKGSLVKNLKDTLGLGKTRRKPSARDASPTPS----TDAEYPANGSGADRIYDLNIPAFVKFAYV 123

  Fly   265 AQQPDELSLTKGTRILILEKSNDGWWRGQSGNSVGWFPSNYTTEDCD------------NDGEIH 317
            |::.|||||.||:|:.::||.:||||||.....:|||||||..|:.|            ..|...
Mouse   124 AEREDELSLVKGSRVTVMEKCSDGWWRGSFNGQIGWFPSNYVLEEADEAAAEAPSFLSLRRGTAL 188

  Fly   318 TYAMAENVLDIVVALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQGQVGLVPRNYLQ 382
            :......||.:|..||.|:|..::|||||||:.:|::::|.:||:|:|.:|.:|||||||:||:.
Mouse   189 SNGQGARVLHVVQTLYPFSSVTEEELSFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVV 253

  Fly   383 ELNDYLA-----TP---YRNASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIE 439
            .|:|..|     ||   |...|||.                                        
Mouse   254 VLSDGPALHPAHTPQISYTGPSASG---------------------------------------- 278

  Fly   440 RPNLAGKSWYYGAITRSQCDTVLNGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRVHVEQNM 504
              ..||:.||||.:||.|.:..||..|.:|||||||||::..|:||||||.||||||:|.:..::
Mouse   279 --RFAGREWYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGRNKHFKVQLVDSV 341

  Fly   505 YCIGQRKFHSLDQLVDHYQRAPIYTNKQGEKLYLVRSL 542
            ||||||:|||:|:||:||::|||:|::.||||||||:|
Mouse   342 YCIGQRRFHSMDELVEHYKKAPIFTSEHGEKLYLVRAL 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_001259845.1 SH3_Nck_1 154..204 CDD:212699 34/48 (71%)
SH3_Nck_2 256..308 CDD:212700 28/60 (47%)
SH3_Nck_3 328..383 CDD:212701 28/54 (52%)
SH2_Nck_family 446..538 CDD:198196 55/91 (60%)
Nck2NP_035009.3 SH3_Nck2_1 2..59 CDD:212832 36/60 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..102 8/27 (30%)
SH3_Nck2_2 114..168 CDD:212835 28/53 (53%)
SH3_Nck2_3 198..256 CDD:212836 28/57 (49%)
SH2_Nck2 283..380 CDD:198272 60/97 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838356
Domainoid 1 1.000 110 1.000 Domainoid score I6312
eggNOG 1 0.900 - - E1_KOG4226
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 340 1.000 Inparanoid score I2345
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46567
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002240
OrthoInspector 1 1.000 - - otm42479
orthoMCL 1 0.900 - - OOG6_106243
Panther 1 1.100 - - O PTHR19969
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4150
SonicParanoid 1 1.000 - - X1672
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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