DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and src-1

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001364829.1 Gene:src-1 / 171722 WormBaseID:WBGene00005077 Length:537 Species:Caenorhabditis elegans


Alignment Length:289 Identity:68/289 - (23%)
Similarity:113/289 - (39%) Gaps:102/289 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 VVKYNYQAQQPDELSL-------TKGTRILILEKSNDGWW-RGQSGNSVGWFPSNYTTEDCDNDG 314
            |.:|..:.|.|.:.::       .:|| |..|..::||.. .|:.|...|......|        
 Worm    24 VSRYPRRFQTPQQQTVFHVNNGGNEGT-ISQLNGTSDGMMGNGRGGGGGGGAQERET-------- 79

  Fly   315 EIHTYAMAENVLDIVVALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQ-GQVGLVPR 378
                          :||||.:.|..|.:|||:|||.:.::|.  |:.||:..|:.: ||.|.|||
 Worm    80 --------------LVALYPYDSRADGDLSFQKGDAMYLLDH--SNCDWWYVRHQRTGQTGYVPR 128

  Fly   379 NYLQELNDYLATPYRNASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNL 443
            |::                                                   :..|.||    
 Worm   129 NFV---------------------------------------------------AKQQTIE---- 138

  Fly   444 AGKSWYYGAITRSQCD-TVLNGHGHDGDFLIRDSETNMGDYSVSLKAP------GRNKHFRV--- 498
             .:.||.|.|.|::.: .||:.|...|.||||:.|.:..:::::::..      |..||:::   
 Worm   139 -SEEWYAGKIPRNRAERLVLSSHLPKGTFLIREREADTREFALTIRDTDDQRNGGTVKHYKIKRL 202

  Fly   499 -HVEQNMYCIGQRKFHSLDQLVDHYQRAP 526
             | :|..:...:|.|.||.:||.:|...|
 Worm   203 DH-DQGYFITTRRTFRSLQELVRYYSDVP 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700 14/57 (25%)
SH3_Nck_3 328..383 CDD:212701 24/55 (44%)
SH2_Nck_family 446..538 CDD:198196 27/92 (29%)
src-1NP_001364829.1 SH3_Src_like 79..130 CDD:212779 24/74 (32%)
SH2_Src_family 138..240 CDD:199827 28/99 (28%)
PTKc_Src_like 270..522 CDD:270630
Blue background indicates that the domain is not in the aligned region.

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