DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and CSK

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_004374.1 Gene:CSK / 1445 HGNCID:2444 Length:450 Species:Homo sapiens


Alignment Length:200 Identity:56/200 - (28%)
Similarity:87/200 - (43%) Gaps:65/200 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 VALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQGQVGLVPRNYLQELNDYLATPYRN 394
            :|.|:|....:|:|.|.|||.|.|| ....||:||||:|..|:.|::|.||:|            
Human    15 IAKYNFHGTAEQDLPFCKGDVLTIV-AVTKDPNWYKAKNKVGREGIIPANYVQ------------ 66

  Fly   395 ASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNLAGKSWYYGAITRSQCD 459
                                        :.||.|...:.|..|          |::|.|||.|.:
Human    67 ----------------------------KREGVKAGTKLSLMP----------WFHGKITREQAE 93

  Fly   460 TVLNGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRV-------HVEQNMYCIGQRKFHSLDQ 517
            .:|. ....|.||:|:|....|||::.:...|:.:|:|:       .:::.:|      |.:|.|
Human    94 RLLY-PPETGLFLVRESTNYPGDYTLCVSCDGKVEHYRIMYHASKLSIDEEVY------FENLMQ 151

  Fly   518 LVDHY 522
            ||:||
Human   152 LVEHY 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701 24/52 (46%)
SH2_Nck_family 446..538 CDD:198196 25/83 (30%)
CSKNP_004374.1 Interaction with PTPN22. /evidence=ECO:0000250|UniProtKB:P41241 9..70 25/95 (26%)
SH3_CSK 11..67 CDD:212703 25/92 (27%)
SH2_csk_like 78..175 CDD:198190 27/95 (28%)
PTKc_Csk 188..443 CDD:133213
Blue background indicates that the domain is not in the aligned region.

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