DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and Abl1

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001106174.1 Gene:Abl1 / 11350 MGIID:87859 Length:1142 Species:Mus musculus


Alignment Length:321 Identity:72/321 - (22%)
Similarity:125/321 - (38%) Gaps:115/321 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 KEKPSL--FDSIKKKVKKGSGSKTLPNCSPSRQVESPTMSRRLPPDPAEAIGTAVVKYNYQAQQP 268
            :.:|||  ...||...|:.|.....|:|:..  ||...:.|.:..|             ::.|  
Mouse    12 QRRPSLPALHFIKGAGKRDSSRHGGPHCNVF--VEHEALQRPVASD-------------FEPQ-- 59

  Fly   269 DELSLTKGTRILILEKSNDGWWRGQSGNSVGWFPSNYTTEDCDNDGEIHTYAMAENVLDIVVALY 333
               .|::..|           |..:.....|  ||                   ||..::.||||
Mouse    60 ---GLSEAAR-----------WNSKENLLAG--PS-------------------ENDPNLFVALY 89

  Fly   334 SFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQGQVGLVPRNYLQELNDYLATPYRNASAS 398
            .|.::.|..||..||::|.::.. ..:.:|.:|:...|| |.||.||:..:|             
Mouse    90 DFVASGDNTLSITKGEKLRVLGY-NHNGEWCEAQTKNGQ-GWVPSNYITPVN------------- 139

  Fly   399 AGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNLAGKSWYYGAITRSQCDTVLN 463
                                |:|:.                       |||:|.::|:..:.:|:
Mouse   140 --------------------SLEKH-----------------------SWYHGPVSRNAAEYLLS 161

  Fly   464 GHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRVHV--EQNMYCIGQRKFHSLDQLVDHY 522
            . |.:|.||:|:||::.|..|:||:..||..|:|::.  :..:|...:.:|::|.:||.|:
Mouse   162 S-GINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHH 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700 7/51 (14%)
SH3_Nck_3 328..383 CDD:212701 20/54 (37%)
SH2_Nck_family 446..538 CDD:198196 27/79 (34%)
Abl1NP_001106174.1 SH3_Abl 84..137 CDD:212784 20/54 (37%)
SH2_ABL 142..235 CDD:198189 28/104 (27%)
PTKc_Abl 254..516 CDD:270645
FABD 1018..1142 CDD:197885
Blue background indicates that the domain is not in the aligned region.

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