DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and GRAP

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_006604.1 Gene:GRAP / 10750 HGNCID:4562 Length:217 Species:Homo sapiens


Alignment Length:204 Identity:59/204 - (28%)
Similarity:89/204 - (43%) Gaps:63/204 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 VALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQGQVGLVPRNYLQELNDYLATPYRN 394
            ||||||.:....||:|.|||.|:|::. ..|.:|||| ..:|..|.:|:||::.           
Human     4 VALYSFQATESDELAFNKGDTLKILNM-EDDQNWYKA-ELRGVEGFIPKNYIRV----------- 55

  Fly   395 ASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNLAGKSWYYGAITRSQCD 459
                                             ||                ..||.|.|:|...:
Human    56 ---------------------------------KP----------------HPWYSGRISRQLAE 71

  Fly   460 TVLNGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRVHVE-QNMYCIGQRKFHSLDQLVDHYQ 523
            .:|....|.|.||||:||::.|::|||:....:.:||:|..| ...|.:.:.||:||::|||.|:
Human    72 EILMKRNHLGAFLIRESESSPGEFSVSVNYGDQVQHFKVLREASGKYFLWEEKFNSLNELVDFYR 136

  Fly   524 RAPIYTNKQ 532
            ...|...:|
Human   137 TTTIAKKRQ 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701 24/52 (46%)
SH2_Nck_family 446..538 CDD:198196 33/88 (38%)
GRAPNP_006604.1 SH3_GRAP_N 2..55 CDD:212881 24/52 (46%)
SH2_Grb2_like 56..150 CDD:199828 35/106 (33%)
SH3_GRAP_C 162..214 CDD:212884
Blue background indicates that the domain is not in the aligned region.

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