DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and HERC1

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_047289166.1 Gene:HERC1 / 8925 HGNCID:4867 Length:4909 Species:Homo sapiens


Alignment Length:61 Identity:14/61 - (22%)
Similarity:24/61 - (39%) Gaps:15/61 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   511 NKKADSGSTKIEFRLNPNLLT--TVIKNLDHLLGVPTGCGEQNM-----VKFVPNILVLDY 564
            |:..|.|...:        ||  ||::....::.:..||...:.     |.|:||....|:
Human    72 NRDVDRGYLAV--------LTIFTVLEFFTAVIAMHFGCQAIHAQASAPVIFLPNAFSADF 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335
ATS1 89..449 CDD:444065
HERC1XP_047289166.1 ATS1 374..703 CDD:444065
RCC1 683..733 CDD:395335
SPRY_HERC1 2063..2220 CDD:293939
UBA_HERC1 2784..2827 CDD:270584
WD40 <3435..3826 CDD:441893
WD40 repeat 3480..3523 CDD:293791
WD40 repeat 3537..3572 CDD:293791
WD40 repeat 3577..3624 CDD:293791
WD40 repeat 3633..3668 CDD:293791
WD40 repeat 3677..3713 CDD:293791
WD40 repeat 3720..3751 CDD:293791
WD40 repeat 3798..3834 CDD:293791
ATS1 4047..4383 CDD:444065
HECTc 4521..4889 CDD:238033
Blue background indicates that the domain is not in the aligned region.

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