Protein Alignment CG3862 and PRAF1

DIOPT Version :9

• Sequence 1: NP_608550.1
• Gene: CG3862 / 33261
• FlyBaseID: FBgn0031286
• Length: 454
• Species: Drosophila melanogaster
• Sequence 2: NP_565144.1
• Gene: PRAF1 / 844030
• AraportID: AT1G76950
• Length: 1103
• Species: Arabidopsis thaliana
• Alignment Length: 533
• Identity: 117/533 - (21%)
• Similarity: 183/533 - (34%)
• Gaps: 150/533 - (28%)

  Fly    22 GVLAQDKSK-IKEYSPKTTDSHEHRVYVWGFQETGA---LGLQTNVKKAKERYTEMVHHPTRLQF 82
            |.|:.|.|: :...||.::.:...|    |....|.   :...|:.|.|:..........:.:..
plant   139 GGLSVDASRELTSSSPSSSSASASR----GHSSPGTPFNIDPITSPKSAEPEVPPTDSEKSHVAL 199

  Fly    83 SNNNEITDVAAGYGFTVYAVNRDDGETLFGSGLNTDSQLGFQVKGNPNDPANLDVIIY------- 140
            .|.|..|.|:...||.| :|:.....:..||..:....||             ||.|:
plant   200 DNKNMQTKVSGSDGFRV-SVSSAQSSSSHGSAADDSDALG-------------DVYIWGEVICDN 250

  Fly   141 ---------------PTAIKLPRVQGETDEDMRVKSMSAGRAHLVVLTQNGTIFTLGNNSYGQCG 190
                           .|.:.:|:.. |::..:.|..::.|..|...:|:.|.|||.|..|.|:.|
plant   251 VVKVGIDKNASYLTTRTDVLVPKPL-ESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLG 314

  Fly   191 RSI---------------------------------IEEERYSKSALIHRIS------------Q 210
            ..|                                 :..|.|:.....|.:.            .
plant   315 HGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIP 379

  Fly   211 EDICGKED--EVVQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGN------------------- 254
            :.|.|..:  .|..|.||..|:..:|..||::|.|.|..|..|.|:
plant   380 KRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTI 444

  Fly   255 ------YHTAGQITLIGGDVEKEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQL----DDSELA 309
                  :|||..:         |.||..|.||..     .:|..|.||:.:..:|    .|..|.
plant   445 AVSCGVWHTAAVV---------EIIVTQSNSSSV-----SSGKLFTWGDGDKNRLGHGDKDPRLK 495

  Fly   310 ETQINIPRALKLTKSIGKIKDVAAGGSFCMALNDQGLVYTWGFGILGFGPFVEQTSKPQHLLPPL 374
            .|  .:|..:..     ....:|.|.|..:.|...|.|:|.|..:.|....::...|    ||.|
plant   496 PT--CVPALIDY-----NFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGK----LPCL 549

  Fly   375 FGRNDFSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP--FKAAINGKVT 437
            .  .|......|..|.||.:|:.|:.|..:::.|||...|.||.|..:|:..|  .:|..:..|.
plant   550 V--EDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVK 612

  Fly   438 KVAYGVDHTIALC 450
            .:|.|.::|.|:|
plant   613 YIACGSNYTAAIC 625

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3862	NP_608550.1	RCC1	43..99	CDD:278826	12/58 (21%)
		RCC1_2	159..188	CDD:290274	10/28 (36%)
		RCC1	175..233	CDD:278826	19/104 (18%)
		RCC1_2	220..249	CDD:290274	11/28 (39%)
		RCC1	236..286	CDD:278826	17/74 (23%)
		RCC1	290..341	CDD:278826	12/54 (22%)
		RCC1	345..395	CDD:278826	14/49 (29%)
		RCC1_2	386..414	CDD:290274	10/27 (37%)
		RCC1	402..449	CDD:278826	14/48 (29%)
PRAF1	NP_565144.1	PH_PLC_plant-like	14..124	CDD:270171
		ATS1	238..628	CDD:227511	94/429 (22%)
		FYVE	627..695	CDD:214499
		COG1340	<828..909	CDD:224259
		BRX_N	879..>908	CDD:404581
		BRX	1022..1077	CDD:400608

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910