DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and AT1G19880

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_173417.2 Gene:AT1G19880 / 838576 AraportID:AT1G19880 Length:538 Species:Arabidopsis thaliana


Alignment Length:421 Identity:97/421 - (23%)
Similarity:171/421 - (40%) Gaps:113/421 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 GETLFGSGLNTDSQLGFQ---VKGNPNDPANLDVIIYPTAIKLPRVQGETDEDMRVKSMSAGRA- 167
            ||.|| .|......:|.:   ::||         ::.||.:: |.|      .:.::.::.|.| 
plant    20 GELLF-CGATAWDIIGKRKGAMEGN---------LVSPTRLR-PLV------GVNIRFVATGCAS 67

  Fly   168 -HLVVLTQNGTIFTLGNNSYGQCGR-SIIEEERYSKSALIHRISQEDICGKEDEVVQVECGQDHS 230
             |.|.|...|..:|.|.|..||.|. .:|:.:|   ..::..:|:.       ::|:...|::|:
plant    68 FHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDR---PTVVSGLSKH-------KIVKAAAGRNHT 122

  Fly   231 MFLTKKGRIYTCGWGADGQTGQGNYHTAGQITLIGGDVE--------KEKIVRLSCSSDCV--LA 285
            :.::..|:....||...||.|.|:....    .:..:||        .:::..::|.:|..  |:
plant   123 VVVSDDGQSLGFGWNKYGQLGLGSAKNG----FVSVEVESTPLPCVVSDEVTNVACGADFTVWLS 183

  Fly   286 LNEAGDAFGWGNSEYGQL---DDSE--LAETQINI-----PRALKLTKSIGK-IKDVAAGGSFCM 339
            ..|.......|..:||||   .|:|  :.::.:.:     ||...:....|: |..||.|.:..:
plant   184 STEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTV 248

  Fly   340 ALNDQGLVYTWGFGILGFGPFVEQTSK----PQHLLPPLFGRNDFSNETTVVSIG-----C---- 391
            |::..|.|||||||  |:|....:..|    |:.:  .:|.||:......::|.|     |    
plant   249 AVDKNGYVYTWGFG--GYGRLGHREQKDEWAPRRI--DVFQRNNVLPPNAILSAGSANSACTAGG 309

  Fly   392 GVFHM-GAVNSDGDLFM---------------------------------WGKNRFGHLGLG--H 420
            |..:| |.:.::||.:|                                 ||..::|.||.|  .
plant   310 GQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCISWGHAQYGELGYGPNG 374

  Fly   421 KKDQFFPFKA-AING-KVTKVAYGVDHTIAL 449
            :|....|.|. .:.| .|..||.|..|::.:
plant   375 QKSSAAPKKVDMLEGMHVMGVACGFCHSMVI 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335
ATS1 89..449 CDD:444065 97/419 (23%)
AT1G19880NP_173417.2 ATS1 61..405 CDD:444065 85/361 (24%)
Blue background indicates that the domain is not in the aligned region.

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