DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and AT5G19420

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001190338.1 Gene:AT5G19420 / 832062 AraportID:AT5G19420 Length:1139 Species:Arabidopsis thaliana


Alignment Length:528 Identity:125/528 - (23%)
Similarity:208/528 - (39%) Gaps:141/528 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LGISRSYTAKAKRGVLAQDKSKIKEYSPKTTDSHEHRVYVWGFQETGALGLQTNVKKAKERYTEM 73
            |.:...|.:..|.||   ||:        .:|...:.|...||...|:..:  :|.......::.
plant   215 LRLHSPYESPPKNGV---DKA--------FSDMSLYAVPPKGFFPPGSATM--SVHSLSSGGSDT 266

  Fly    74 VHHPTR------LQFSNNNEITDVAAGYGFTVYAVNRDDGETL-----FGSGLNTDSQLGFQVKG 127
            :|...:      .:.|.::.|:..:.|.|       .|||:||     :|.|:. :..||   .|
plant   267 LHGHMKGMGMDAFRVSLSSAISSSSHGSG-------HDDGDTLGDVFMWGEGIG-EGVLG---GG 320

  Fly   128 NPNDPANLDV---IIYPTAIKLPRVQGETDEDMRVKSMSAGRAHLVVLTQNGTIFTLGNNSYGQC 189
            |....::|::   .:.|.|:       |:...:.|::::.|..|.|::|:.|..|:.|..|.|:.
plant   321 NHRVGSSLEIKMDSLLPKAL-------ESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRL 378

  Fly   190 GRSIIEEERYSKSALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGN 254
            |..:....::.|  ||..::..:|     |:  |.||:.||..:|..|.:||.|.|..|..|.||
plant   379 GHGVDSNVQHPK--LIDALNTTNI-----EL--VACGEYHSCAVTLSGDLYTWGKGDFGILGHGN 434

  Fly   255 --------------------------YHT-----AGQITLIG---------GD-----VEKE--- 271
                                      |||     |||:...|         ||     :.:|   
plant   435 EVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDS 499

  Fly   272 ----KIVRLSC-----------------SSDCVLALNEAGDAFGWGNSEYGQLDDSELAETQINI 315
                :.||.:|                 ||:|     .:|..|.||:.:..:|...: .|.:: :
plant   500 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC-----SSGKLFTWGDGDKSRLGHGD-KEPKL-V 557

  Fly   316 PRALKLTKSIGKIKDVAAGGSFCMALNDQGLVYTWGFGILGFGPFVEQTSKPQHLLPPLFGRNDF 380
            |..:..... .....||.|.|..:||...|.|||.|..:.|      |...| |....:..|.|.
plant   558 PTCVAALVE-PNFCQVACGHSLTVALTTSGHVYTMGSPVYG------QLGNP-HADGKVPTRVDG 614

  Fly   381 S-NETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP--FKAAINGKVTKVAYG 442
            . :::.|..|.||.:|:..:.|..:::.|||...|.||.|...|:..|  .::..:.:|..:|.|
plant   615 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACG 679

  Fly   443 VDHTIALC 450
            .:.|.|:|
plant   680 SNFTAAVC 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335 10/61 (16%)
ATS1 89..449 CDD:444065 107/439 (24%)
AT5G19420NP_001190338.1 PH_PLC_plant-like 57..164 CDD:270171
ATS1 351..686 CDD:444065 89/358 (25%)
FYVE 690..757 CDD:426221
Tropomyosin_1 <915..959 CDD:403808
BRX_N 949..982 CDD:404581
BRX_assoc 990..1058 CDD:406921
BRX 1064..1119 CDD:429960
Blue background indicates that the domain is not in the aligned region.

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