DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and AT5G12350

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_568268.3 Gene:AT5G12350 / 831110 AraportID:AT5G12350 Length:1075 Species:Arabidopsis thaliana


Alignment Length:526 Identity:115/526 - (21%)
Similarity:196/526 - (37%) Gaps:154/526 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GISRSYT-----AKAKRGVLAQDKSKIKEYSPKTTDSHEHRVYVWGFQETGALGLQTNVKKAKER 69
            |:.::::     |...:|....|.:.|..:|..:...|.|         ...:|:..        
plant   193 GLDKAFSDMALYAVPPKGFYPSDSATISVHSGGSDSMHGH---------MRGMGMDA-------- 240

  Fly    70 YTEMVHHPTRLQFSNNNEITDVAAGYGFTVYAVNRDDGETL-----FGSGLNTDSQLGFQVKGNP 129
                      .:.|.::.::..:.|.|       .|||:.|     :|.|:. :..||   .||.
plant   241 ----------FRVSMSSAVSSSSHGSG-------HDDGDALGDVFIWGEGIG-EGVLG---GGNR 284

  Fly   130 NDPANLDV---IIYPTAIKLPRVQGETDEDMRVKSMSAGRAHLVVLTQNGTIFTLGNNSYGQCGR 191
            ...::.|:   .:.|.|:       |:...:.|::::.|..|.|::|:.|..|:.|..|.|:.|.
plant   285 RVGSSFDIKMDSLLPKAL-------ESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGH 342

  Fly   192 SIIEEERYSKSALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGN-- 254
            .:  :....:..||..::..:|     |:  |.||:.||..:|..|.:||.|.|..|..|.||  
plant   343 GV--DSNIQQPKLIDALNTTNI-----EL--VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEV 398

  Fly   255 ------------------------YHT-----AGQITLIG-------GDVEKEKI---------- 273
                                    |||     |||:...|       |..:|:.:          
plant   399 SHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLK 463

  Fly   274 ----VRLSC-----------------SSDCVLALNEAGDAFGWGNSEYGQLDDSELAETQINIPR 317
                ||.:|                 ||:|     .:|..|.||:.:.|:|.... .|.:: :|.
plant   464 GLRTVRAACGVWHTAAVVEVMVGSSSSSNC-----SSGKLFTWGDGDKGRLGHGN-KEPKL-VPT 521

  Fly   318 ALKLTKSIGKIKDVAAGGSFCMALNDQGLVYTWGFGILG-FGPFVEQTSKPQHLLPPLFGRNDFS 381
            .:..... .....||.|.|..:||...|.|||.|..:.| .|........|..:...|       
plant   522 CVAALVE-PNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKL------- 578

  Fly   382 NETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP--FKAAINGKVTKVAYGVD 444
            :::.|..|.||.:|:..:.|..:::.|||...|.||.|...|:..|  .::..:.:|..:|.|.:
plant   579 HKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTN 643

  Fly   445 HTIALC 450
            .|.|:|
plant   644 FTAAVC 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335 5/55 (9%)
ATS1 89..449 CDD:444065 103/439 (23%)
AT5G12350NP_568268.3 PH_PLC_plant-like 19..129 CDD:270171
ATS1 313..648 CDD:444065 86/358 (24%)
FYVE 652..719 CDD:426221
Tropomyosin_1 <869..>906 CDD:403808
BRX_N 911..944 CDD:404581
BRX_assoc 953..1005 CDD:406921
BRX 1006..1061 CDD:429960
Blue background indicates that the domain is not in the aligned region.

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