DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3862 and AT3G47660

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001325559.1 Gene:AT3G47660 / 823920 AraportID:AT3G47660 Length:990 Species:Arabidopsis thaliana


Alignment Length:520 Identity:112/520 - (21%)
Similarity:195/520 - (37%) Gaps:146/520 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IKEYSPKTTDSHEHRVYVWG--FQETGALGLQTNVKKAKERYTEMVHHP---------------- 77
            ::|::.|.:.||.:.....|  |.|..:   ||.|.||.. ..|:||.|                
plant   201 LQEHAKKASGSHCNTPQRLGKVFSEVLS---QTAVLKALS-LDELVHKPHTSPPETIENRPTNHS 261

  Fly    78 ----TRLQFSNNNEITDVAAGYGF-------TVYAVNRDDGETLFGSGLNTDSQLGFQVKGNPND 131
                ...::|.::.::..:.|..|       .|:......|:.|.|.|::         |...:.
plant   262 SPGVDTSKYSISSAVSSSSQGSTFEDLKSLCDVFVWGESIGDGLLGGGMH---------KSGSSS 317

  Fly   132 PANLDVIIYPTAIKLPRVQGETDEDMRVKSMSAGRAHLVVLTQNGTIFTLGNNSYGQCGRSIIEE 196
            ....|..       ||:|. ::...:..:|:|.|..:.|::|:.|.:::.|..|.|:.|..:...
plant   318 SLMTDSF-------LPKVL-KSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSY 374

  Fly   197 ERYSKSALIHRISQEDI----CGKEDE-------------------------------------- 219
            ..:.|  ||...:...:    ||:...                                      
plant   375 VPHPK--LIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILG 437

  Fly   220 ------VVQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQITLIGGDVEKE------- 271
                  |..:.||..|:.|:|.:|:::|.|.|..|..|.|:        .|..::.:|       
plant   438 QMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGD--------RISTNIPREVEALNGC 494

  Fly   272 KIVRLSC----SSDCVLALNEA---GDAFGWGNSEYGQLDDSELAETQINIPRALKLTKSIGKIK 329
            :.::.:|    |:..|....||   |..|.||:.:.|:|...:: |.:: ||..:....:. ..:
plant   495 RTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDI-ECRL-IPSCVTELDTT-SFQ 556

  Fly   330 DVAAGGSFCMALNDQGLVYTWGFGILGFGPFVEQTSKPQHLL---PPLFGRNDFSNETTVVSIGC 391
            .||.|.|..:||:..|.||..|            |:.|.|.:   |...  .....::.|..:.|
plant   557 QVACGQSITVALSMSGQVYAMG------------TADPSHDIVRAPSCI--EGGLGKSFVQEVAC 607

  Fly   392 GVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP-FKAAINGK-VTKVAYGVDHTIALC--KP 452
            |..|:..:||..:::.|||...|.||.|..:.:..| ...|:.|| |.||..|.::|..:|  ||
plant   608 GFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKP 672

  Fly   453  452
            plant   673  672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335 15/84 (18%)
ATS1 89..449 CDD:444065 92/433 (21%)
AT3G47660NP_001325559.1 PH-like 15..>89 CDD:473070
ATS1 336..644 CDD:444065 71/334 (21%)
FYVE 673..738 CDD:214499 112/520 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.