Sequence 1: | NP_608550.1 | Gene: | CG3862 / 33261 | FlyBaseID: | FBgn0031286 | Length: | 454 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005160175.1 | Gene: | herc5.2 / 794323 | ZFINID: | ZDB-GENE-090311-16 | Length: | 987 | Species: | Danio rerio |
Alignment Length: | 305 | Identity: | 77/305 - (25%) |
---|---|---|---|
Similarity: | 130/305 - (42%) | Gaps: | 65/305 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 159 VKSMSAGRAHLVVLTQNG--TIFTLGNNSYGQCGRSIIEEERYSKSALIHRISQEDICGKEDEVV 221
Fly 222 QVECGQDHSMFLTKKGRI-----YTCGWGADGQTGQGNYHTAGQITLIGGDVEKEKIVRLSCSSD 281
Fly 282 CVLALNEAGDAFGWGNSEYGQLDDSELAETQ--INIPRALKLTKSIGKIKDVAAGGSFCMALNDQ 344
Fly 345 GLVYTWG---FGILGFGPFVEQTSKPQHLLPPLFGRNDFSNETTVVSIGCGVFHMGAVNSDGDLF 406
Fly 407 MWGKNRFGHLGLGHKKDQFFPFKAA--INGKVTKVAYGVDHTIAL 449 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG3862 | NP_608550.1 | RCC1 | 43..99 | CDD:278826 | |
RCC1_2 | 159..188 | CDD:290274 | 8/30 (27%) | ||
RCC1 | 175..233 | CDD:278826 | 10/59 (17%) | ||
RCC1_2 | 220..249 | CDD:290274 | 7/33 (21%) | ||
RCC1 | 236..286 | CDD:278826 | 6/54 (11%) | ||
RCC1 | 290..341 | CDD:278826 | 16/52 (31%) | ||
RCC1 | 345..395 | CDD:278826 | 16/52 (31%) | ||
RCC1_2 | 386..414 | CDD:290274 | 9/27 (33%) | ||
RCC1 | 402..449 | CDD:278826 | 17/48 (35%) | ||
herc5.2 | XP_005160175.1 | RCC1_2 | 120..149 | CDD:290274 | 7/28 (25%) |
RCC1 | 136..186 | CDD:278826 | 16/53 (30%) | ||
RCC1 | 189..238 | CDD:278826 | 17/57 (30%) | ||
RCC1 | 242..290 | CDD:278826 | 17/47 (36%) | ||
RCC1 | 296..347 | CDD:278826 | |||
HECTc | 649..985 | CDD:294058 | |||
HECTc | 678..984 | CDD:214523 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |