DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and Hectd3

DIOPT Version :9

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_780453.1 Gene:Hectd3 / 76608 MGIID:1923858 Length:861 Species:Mus musculus


Alignment Length:173 Identity:42/173 - (24%)
Similarity:64/173 - (36%) Gaps:60/173 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 TTDSH--EHRVYVWGFQETGALGLQTNVKKAKERYTEMVHHPTRLQFSNNNE--ITDVAAGYGFT 98
            |||.:  ..||.|:|       |...|:||              |...|.:|  |.||......|
Mouse   300 TTDDNFMPKRVVVYG-------GEGDNLKK--------------LSDVNIDETLIGDVCVLEDMT 343

  Fly    99 VY--------AVNRDDGETLFGSGLNTDSQL-GFQVKGNPNDPANLDVIIYPTA--IKLPRVQGE 152
            |:        ...||||         .|.:| |.::|.:......|:..::..|  ::.||::| 
Mouse   344 VHLPIIEIRIVECRDDG---------IDVRLRGVKIKSSRQRELGLNADLFQPASLVRYPRLEG- 398

  Fly   153 TDEDMR----------VKSMSAGRAHLVVLTQNGTIFTLGNNS 185
            ||.::.          :|.:.:...|||....:    |||..|
Mouse   399 TDPEVLYRRAVLLQRFIKILDSVLHHLVPAWDH----TLGTFS 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:278826 14/57 (25%)
RCC1_2 159..188 CDD:290274 8/27 (30%)
RCC1 175..233 CDD:278826 4/11 (36%)
RCC1_2 220..249 CDD:290274
RCC1 236..286 CDD:278826
RCC1 290..341 CDD:278826
RCC1 345..395 CDD:278826
RCC1_2 386..414 CDD:290274
RCC1 402..449 CDD:278826
Hectd3NP_780453.1 APC10-HECTD3 238..371 CDD:176487 26/100 (26%)
HECTc 528..849 CDD:214523
HECT 586..845 CDD:279026
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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