Sequence 1: | NP_608550.1 | Gene: | CG3862 / 33261 | FlyBaseID: | FBgn0031286 | Length: | 454 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031752069.1 | Gene: | rpgr / 733454 | XenbaseID: | XB-GENE-982274 | Length: | 1225 | Species: | Xenopus tropicalis |
Alignment Length: | 361 | Identity: | 95/361 - (26%) |
---|---|---|---|
Similarity: | 154/361 - (42%) | Gaps: | 86/361 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 152 ETDEDMRVKSMSAGRAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKSALIHRISQEDICGK 216
Fly 217 EDEVVQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQITL--IGGDVEKEKIVRLSCS 279
Fly 280 SDCVLALNEAGDAFGWGNSEYGQL----------------------------------DDSEL-- 308
Fly 309 ----AETQINIP-----------RALKLTKSIGKIKDVAAGGSFCMALNDQGLVYTWG---FGIL 355
Fly 356 GFGPFVEQTSKPQHLLPPLFGRNDFSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGH 420
Fly 421 KK--DQFFPFKAA--INGKVTKVAYGVDHTIALCKP 452 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG3862 | NP_608550.1 | RCC1 | 43..99 | CDD:278826 | |
RCC1_2 | 159..188 | CDD:290274 | 9/28 (32%) | ||
RCC1 | 175..233 | CDD:278826 | 15/57 (26%) | ||
RCC1_2 | 220..249 | CDD:290274 | 9/28 (32%) | ||
RCC1 | 236..286 | CDD:278826 | 16/51 (31%) | ||
RCC1 | 290..341 | CDD:278826 | 19/101 (19%) | ||
RCC1 | 345..395 | CDD:278826 | 15/52 (29%) | ||
RCC1_2 | 386..414 | CDD:290274 | 7/27 (26%) | ||
RCC1 | 402..449 | CDD:278826 | 17/50 (34%) | ||
rpgr | XP_031752069.1 | ATS1 | <42..334 | CDD:227511 | 84/317 (26%) |
RCC1 | 315..362 | CDD:395335 | 16/46 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |