DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3862 and ALS2

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_065970.2 Gene:ALS2 / 57679 HGNCID:443 Length:1657 Species:Homo sapiens


Alignment Length:425 Identity:85/425 - (20%)
Similarity:148/425 - (34%) Gaps:98/425 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DKSKIKEYSPKTTDSHEHRVYVWGFQETGALGLQ--TNVKKAKERYTEMVHHPTRLQFSNNNEIT 89
            |...:.||..|.:|   |.|     :|....|.:  .:....:|....:...||....:.|:.:.
Human   341 DTQAVNEYLRKLSD---HSV-----REDSEHGEKPVPSQPLLEEAIPNLHSPPTTSTSALNSLVV 397

  Fly    90 DVAAGYGFTVYAVNRDDGETLFGSGLN----TDSQLGFQVKGNPNDPANLDVIIYPTAIKLPRVQ 150
            ..|:..|..| |...:.|.......:|    |..:.|.|...:...|..|              :
Human   398 SCASAVGVRV-AATYEAGALSLKKVMNFYSTTPCETGAQAGSSAIGPEGL--------------K 447

  Fly   151 GETDEDMRVKSMSAGRAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEE------RYSKSALIHRIS 209
            ...:|.::.:||...::..:|                    .|.|||      |.|...|:.::|
Human   448 DSREEQVKQESMQGKKSSSLV--------------------DIREEETEGGSRRLSLPGLLSQVS 492

  Fly   210 QEDICGKEDEV-------VQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQ---ITLI 264
            .. :..|...|       .....|:..::..:.:..::|.|.|.:||.|.|:.....|   :..:
Human   493 PR-LLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCL 556

  Fly   265 GGDVEKEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQLDDSELAETQINIPRALKLTKSIGKIK 329
            .|    ::::.|.......|||......:.||::.:|||..|:...|   :||..|::...| :.
Human   557 DG----KEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTT---VPRLAKISSENG-VW 613

  Fly   330 DVAAGGSFCMALND-----QGLVYTWGFGILGFGPFVEQTSKPQHLLPPLFGRNDFSNETTVVSI 389
            .:|||..:.:.|.|     .||.|:      |.....|..:.|:          :.|...|.|.:
Human   614 SIAAGRDYSLFLVDTEDFQPGLYYS------GRQDPTEGDNLPE----------NHSGSKTPVLL 662

  Fly   390 GC---GVFHMGAVNSDGDLFMWGKNRFGHLGLGHK 421
            .|   |.........|..|.:..||..|::...|:
Human   663 SCSKLGYISRVTAGKDSYLALVDKNIMGYIASLHE 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335 10/57 (18%)
ATS1 89..449 CDD:444065 72/361 (20%)
ALS2NP_065970.2 ATS1 <39..219 CDD:444065
RCC1 1. /evidence=ECO:0000305 59..108
RCC1 2. /evidence=ECO:0000305 109..167
RCC1 3. /evidence=ECO:0000305 169..218
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 432..480 12/81 (15%)
RCC1 4. /evidence=ECO:0000305 525..576 13/54 (24%)
ATS1 <527..>683 CDD:444065 42/179 (23%)
RCC1 5. /evidence=ECO:0000305 578..627 15/52 (29%)
RhoGEF 695..879 CDD:470622 1/3 (33%)
PH_alsin 905..1010 CDD:241423
COG4642 <1049..1249 CDD:443680
MORN 1 1049..1071
MORN 2 1072..1094
MORN 3 1100..1122
MORN 4 1123..1145
MORN 5 1151..1173
MORN 6 1175..1197
MORN 7 1198..1220
MORN 8 1221..1244
VPS9 1552..1656 CDD:460489
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.