DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and rccd1

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_073798700.1 Gene:rccd1 / 567613 ZFINID:ZDB-GENE-030131-3552 Length:376 Species:Danio rerio


Alignment Length:392 Identity:96/392 - (24%)
Similarity:144/392 - (36%) Gaps:104/392 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 FGSGLNTDSQL-----GFQVKGNPNDPANLDVIIYPTAIKLPRVQGETDEDMRVKSMSAGRAHLV 170
            ||.|.|...|:     ..|||...|.|    |:|.....|    .|....|.|:::..:.||.| 
Zfish     4 FGFGFNGFGQISRADVSGQVKCKVNSP----VLISDDECK----SGVNRSDRRIRACWSSRADL- 59

  Fly   171 VLTQNGTIFTLGNNSYGQ---------CGRSIIEEERYSKSALIHRISQEDICGKEDEVVQVECG 226
            ..||:|:...|.....|.         |..::|.|...:.| ...|:...:|..:::::|     
Zfish    60 QQTQSGSGVYLSGCVCGPSAQVCVSQGCTDALISETHLTLS-FTDRVELWEIKPQQNQLV----- 118

  Fly   227 QDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQITLIGGDVE---------KEKIVRLSCSSDC 282
                             |..:.:...  .|||....:.||.|:         |...|.|...|:.
Zfish   119 -----------------WKREHELSA--EHTAALPLVSGGFVQHKPPFFHPLKLCAVSLVLGSEH 164

  Fly   283 VLALNEAGDAFGWGNSEYGQLDDSELAETQINIPRALKLTKSIGKIKDVAAGGSFCMALNDQGLV 347
            .|.|...|..:.||:..:|||....|  |.:..|:|::....: .||.||||.....|::..|.:
Zfish   165 ALLLTADGTLYSWGSGSHGQLGHGAL--TSLEDPQAVEALWGV-PIKAVAAGNWHSAAVSSGGDL 226

  Fly   348 YTWGF---GILGF-----------GPFVEQTSKPQH--------------LLPPLFGRNDFSNET 384
            |.||:   |.||.           |.......:|.:              ..|.|.   |.:|.:
Zfish   227 YMWGWNESGQLGLPSRGLEEEKRRGNGSGNDDQPMNTDEKSQTDVFISIQAFPALV---DIANMS 288

  Fly   385 TVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLG--HKKDQFFPFKAAINGKVTKVAYGVDHTI 447
            .:..|.||..|..||.|.|||:.||..::|.||.|  |..|:           .|.|.|...|::
Zfish   289 EISRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTEHSTDE-----------PTPVDYFSSHSL 342

  Fly   448 AL 449
            ::
Zfish   343 SV 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335
ATS1 89..449 CDD:444065 96/390 (25%)
rccd1XP_073798700.1 None
Blue background indicates that the domain is not in the aligned region.

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