DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and RCBTB1

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_060661.3 Gene:RCBTB1 / 55213 HGNCID:18243 Length:531 Species:Homo sapiens


Alignment Length:328 Identity:84/328 - (25%)
Similarity:146/328 - (44%) Gaps:57/328 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 DGETLFGSGLNTDSQLGFQVKGNPNDPANLDVIIYPTAIKLPRVQGETDEDMRVKSMSAGRA-HL 169
            |.:.:|..|||..:.||   .|:     |...:: |.  ||..:.|:     ::||:|.|.. |:
Human    39 DNDEVFVFGLNYSNCLG---TGD-----NQSTLV-PK--KLEGLCGK-----KIKSLSYGSGPHV 87

  Fly   170 VVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKSALIHRISQEDICGK--EDEVVQVECGQDHSMF 232
            ::.|::|.::..|:|.|.|.|.....:          .|:...:|..  ..:||:|.||..|||.
Human    88 LLSTEDGVVYAWGHNGYSQLGNGTTNQ----------GIAPVQVCTNLLIKQVVEVACGSHHSMA 142

  Fly   233 LTKKGRIYTCGWGADGQTGQGNYHTAGQIT--LIGGDVEKEKIVRLSCSSDCVLALNEAGDAFGW 295
            |...|.::..|:...||.|.|:  ||.|.|  .:...:..:::|.::|.....:|:.:.|:.:||
Human   143 LAADGEVFAWGYNNCGQVGSGS--TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

  Fly   296 GNSEYGQL----DDSELAETQINIPRALKLTKSIGKIKDVAAGGSFCMALNDQGLVYTWG---FG 353
            |.:..|||    :.::|...::....::       .:..:..|.:..:||.|:||:|.||   :|
Human   206 GYNGNGQLGLGNNGNQLTPVRVAALHSV-------CVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

  Fly   354 ILGFGPFVEQTSKPQHLLPPLFGRNDFSNETTVVSIGCGVFHMGAVNSD-GDLFMWGKNRFGHLG 417
            .||.|. ......|.|::        ...|..|....|...|..|..:. |.::|||:.|...:.
Human   264 QLGTGN-KNNLLSPAHIM--------VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVI 319

  Fly   418 LGH 420
            |.|
Human   320 LPH 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335
ATS1 89..449 CDD:444065 84/328 (26%)
RCBTB1NP_060661.3 ATS1 13..311 CDD:444065 79/315 (25%)
RCC1 1 40..91 17/66 (26%)
RCC1 2 93..145 17/61 (28%)
RCC1 3 147..198 13/52 (25%)
RCC1 4 199..250 11/57 (19%)
RCC1 5 252..302 16/58 (28%)
RCC1 6 304..356 7/19 (37%)
BTB_POZ_RCBTB1_CLLD7 350..466 CDD:349662
BACK_RCBTB1 466..531 CDD:350603
Blue background indicates that the domain is not in the aligned region.

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