DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG3862 and rcbtb1

DIOPT Version :9

Sequence 1:	NP_608550.1	Gene:	CG3862 / 33261	FlyBaseID:	FBgn0031286	Length:	454	Species:	Drosophila melanogaster
Sequence 2:	NP_001017352.2	Gene:	rcbtb1 / 550106	XenbaseID:	XB-GENE-987316	Length:	599	Species:	Xenopus tropicalis

Alignment Length:	276	Identity:	79/276 - (28%)
Similarity:	129/276 - (46%)	Gaps:	28/276 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly   170 VVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKSALIHRISQEDICGKEDEVVQVECGQ-DHSMFL 233
            :..|||..:|..|.||....|..      .::|.:|.| ..:.:|||  .:|.:..|. .|.:..
Frog   104 IYTTQNNEVFVFGMNSSNCLGTG------DNQSTIIPR-RLDVLCGK--RIVDLSYGSGPHILVC 159

  Fly   234 TKKGRIYTCGWGADG--QTGQGNYHTAGQITLIGGDVEKEKIVRLSCSSDCVLALNEAGDAFGWG 296
            .:.|.:|:  ||.:|  |.|.||.........:..::..:|:::::|.|...:||...|:.|.||
Frog   160 NEDGEVYS--WGHNGYSQLGNGNAIQGVAPVQVCMELLAKKVIQVACGSHHSMALTSDGEVFCWG 222

  Fly   297 NSEYGQLDDSELAETQINIPRALKLTKSIGKIKDVAAGGSFCMALNDQGLVYTWGF---GILGFG 358
            .:..||:.....|..  ::||.:..|.....:..:|||.|..||:.|.|.||.||:   |.||.|
Frog   223 YNNCGQVGSGTTANQ--SVPRRVSATLQSKVVVSIAAGQSSSMAVTDNGHVYCWGYNGTGQLGIG 285

  Fly   359 PFVEQTSKPQHLLPPLFGRNDFSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKD 423
                  :....|:|   .|..|::...::.:..|..|..|::..|.|:.||.|..|.||:|:|.:
Frog   286 ------NTGNQLMP---CRLVFAHPVCIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNKSN 341

  Fly   424 QFFPFKAAINGKVTKV 439
            |..|.|...|.::.:|
Frog   342 QTAPVKVGTNERMVEV 357

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG3862	NP_608550.1	RCC1	43..99	CDD:278826
		RCC1_2	159..188	CDD:290274	7/17 (41%)
		RCC1	175..233	CDD:278826	15/58 (26%)
		RCC1_2	220..249	CDD:290274	8/31 (26%)
		RCC1	236..286	CDD:278826	12/51 (24%)
		RCC1	290..341	CDD:278826	15/50 (30%)
		RCC1	345..395	CDD:278826	14/52 (27%)
		RCC1_2	386..414	CDD:290274	8/27 (30%)
		RCC1	402..449	CDD:278826	15/38 (39%)
rcbtb1	NP_001017352.2	RCC1	111..153	CDD:278826	13/50 (26%)
		RCC1	162..212	CDD:278826	12/51 (24%)
		RCC1	215..265	CDD:278826	15/51 (29%)
		RCC1	268..317	CDD:278826	15/57 (26%)
		RCC1_2	304..333	CDD:290274	8/28 (29%)
		RCC1	321..362	CDD:278826	15/37 (41%)
		BTB	428..532	CDD:279045
		BTB	439..535	CDD:197585
		SPOP_C_like	535..591	CDD:269810
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.010