DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and HERC5

DIOPT Version :9

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_011530324.2 Gene:HERC5 / 51191 HGNCID:24368 Length:1100 Species:Homo sapiens


Alignment Length:406 Identity:98/406 - (24%)
Similarity:151/406 - (37%) Gaps:113/406 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VWGFQETGALGLQTNVKKAKERYTEMVHHPTRLQFSNNNEITDVAAGYGFTVYAVNRDDGETLFG 112
            :|.|  ..|.||...:.:..|...::...|.||.....       .|.|..|:       :.|.|
Human   184 LWLF--PSAAGLHRALLRRVEVTRQLCCSPGRLAVLER-------GGAGVQVH-------QLLAG 232

  Fly   113 SGLNTDSQLGFQVKGNPNDPANLDVIIYPTAIKLPRVQGETDEDMRVKSMSAGRAHLVVLTQNGT 177
            ||       |.:.               |..|||       .::|::.|:..|..|:::|:.:|.
Human   233 SG-------GART---------------PKCIKL-------GKNMKIHSVDQGAEHMLILSSDGK 268

  Fly   178 IFTLGNNSYGQCGRSIIEEERYSKSALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKGRIYTC 242
            .|               |.:.||    :..:..|.|. :|.:::|:.||..||:.|:|.|.::..
Human   269 PF---------------EYDNYS----MKHLRFESIL-QEKKIIQITCGDYHSLALSKGGELFAW 313

  Fly   243 GWGADGQTGQGNYHTAGQITLIGGDVEKEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQL---- 303
            |....||.|.|....:.....|...:....:.::|......:||:.:|:.:.||.:|.|||    
Human   314 GQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGH 378

  Fly   304 ----DDSELAETQINIPRALKLTKSIGKIKDVAAGGSFCMALNDQGLVYTWGFGILGFGPFVEQT 364
                ||..|.|...|           .|::.||.|||....|...||::|:|.|..|        
Human   379 TESKDDPSLIEGLDN-----------QKVEFVACGGSHSALLTQDGLLFTFGAGKHG-------- 424

  Fly   365 SKPQHLLPPLFGRNDFSNET-----------TVVSIGCGVFHMGAVNSD-GDLFMWGKNRFGHLG 417
                     ..|.|...||.           .|..|.||.:|..|..|| |.:|.:|..:.|.||
Human   425 ---------QLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 480

  Fly   418 LGHKKDQFFPFKAAIN 433
            .|..:||..|....::
Human   481 NGGTRDQLMPLPVKVS 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:278826 11/50 (22%)
RCC1_2 159..188 CDD:290274 6/28 (21%)
RCC1 175..233 CDD:278826 13/57 (23%)
RCC1_2 220..249 CDD:290274 9/28 (32%)
RCC1 236..286 CDD:278826 8/49 (16%)
RCC1 290..341 CDD:278826 18/58 (31%)
RCC1 345..395 CDD:278826 14/60 (23%)
RCC1_2 386..414 CDD:290274 11/28 (39%)
RCC1 402..449 CDD:278826 11/33 (33%)
HERC5XP_011530324.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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