Protein Alignment CG3862 and rcc1

DIOPT Version :10

• Sequence 1: NP_608550.1
• Gene: CG3862 / 33261
• FlyBaseID: FBgn0031286
• Length: 454
• Species: Drosophila melanogaster
• Sequence 2: NP_998343.1
• Gene: rcc1 / 406457
• ZFINID: ZDB-GENE-040426-2216
• Length: 418
• Species: Danio rerio
• Alignment Length: 477
• Identity: 118/477 - (24%)
• Similarity: 193/477 - (40%)
• Gaps: 116/477 - (24%)

  Fly    20 KRGVLAQDKSKIKEYSPKTTDSHEHR---VYVWGFQETGALGLQTNVKKAKERYTEMVHHPTRLQ 81
            ||...|...|.:.:....:..||...   |.|.|..:.|.|||..:|.:.|:  ..:|..|..:
Zfish     8 KRQTAAPSDSTVAKKLKVSHISHGQEKGLVLVLGQGDVGQLGLGEDVMERKK--PALVTLPEGI- 69

  Fly    82 FSNNNEITDVAAGYGFTVYAVNRDDGETLFGSGLNTDSQLGFQV--KGNPNDPANLDVIIYPTAI 144
                  :..||.|    ::.|...|...::..|.|.:..||...  :|:...||.:|:
Zfish    70 ------VQAVAGG----MHTVCLSDTGNVYTFGCNDEGALGRDTSEEGSETVPAKVDL------- 117

  Fly   145 KLPRVQGETDEDMRVKSMSAGRAHLVVLTQNGTIFTLGN--NSYGQCGRSIIEEERYSKSALIHR 207
                  ||     ::..:|||.:|...||::|.::..|:  ::.|..|             |:..
Zfish   118 ------GE-----KIIQVSAGDSHSAALTEDGGVYVWGSFRDNNGVIG-------------LLEP 158

  Fly   208 ISQEDICGK---EDEVVQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQITLIGGDVE 269
            :.:..:..|   :..||::..|.||.:.||..|.:||.|.|..||.|:...|.|.:    ||
Zfish   159 MKKCTVPVKVPIDKPVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGRVAEHFANR----GG--- 216

  Fly   270 KEKIVRL-------------------SCSSDCVLALNEAGDAFGWGNSEYGQLDDSELAETQIN- 314
            ::.::||                   .|.:....|:::.|..:|:|.|.|.||.      ||..
Zfish   217 RKGLMRLLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKEGHVYGFGLSNYHQLG------TQSTN 275

  Fly   315 ---IPRALKLTKS-----IGKIKDVAAGGSFCMALNDQGLVYTWG---FGILGFGPFVEQTSKPQ 368
               :|..|...|:     :|    .:.|....:.||.:|..|:.|   :|.||.|..|.:.|:|.
Zfish   276 TCFVPVKLSSFKNSTTSWVG----FSGGQHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPT 336

  Fly   369 HLLPPLFGRNDFSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPF----K 429
             ::|.:       ::..||:.|..|.:  ||...|.:|.||......||.|.::|::.|.    |
Zfish   337 -VVPGI-------SDVQVVACGASVSY--AVTKQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGK 391

  Fly   430 AAINGKVTKVAYGVDHTIALCK 451
            ...|..|..|:.|..||:.|.|
Zfish   392 QLENRVVLSVSSGGQHTVLLVK 413

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3862	NP_608550.1	RCC1	43..99	CDD:395335	14/58 (24%)
		ATS1	89..449	CDD:444065	99/401 (25%)
rcc1	NP_998343.1	RCC1	34..82	CDD:395335	15/60 (25%)
		ATS1	70..414	CDD:444065	101/406 (25%)