| Sequence 1: | NP_608550.1 | Gene: | CG3862 / 33261 | FlyBaseID: | FBgn0031286 | Length: | 454 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038955861.1 | Gene: | Rpgr / 367733 | RGDID: | 1560136 | Length: | 1380 | Species: | Rattus norvegicus |
| Alignment Length: | 349 | Identity: | 88/349 - (25%) |
|---|---|---|---|
| Similarity: | 143/349 - (40%) | Gaps: | 79/349 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 162 MSAGRAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKSALIHRISQEDIC---GKEDEVVQV 223
Fly 224 ECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQITLIGGDVEKEKIVRLSCSSDCVLALNE 288
Fly 289 AGDAFGWGNSEYGQL----------------------------------DDSEL------AETQI 313
Fly 314 NIPRALKLT-----KSIG---KIKDVAAGGSFCMALNDQGLVYTWG---FGILGFGPFVEQTSKP 367
Fly 368 QHLLPPLFGRNDFSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKK--DQFFPFKA 430
Fly 431 A--INGKVTKVAYGVDHTIALCKP 452 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG3862 | NP_608550.1 | RCC1 | 43..99 | CDD:278826 | |
| RCC1_2 | 159..188 | CDD:290274 | 7/25 (28%) | ||
| RCC1 | 175..233 | CDD:278826 | 16/60 (27%) | ||
| RCC1_2 | 220..249 | CDD:290274 | 8/28 (29%) | ||
| RCC1 | 236..286 | CDD:278826 | 12/49 (24%) | ||
| RCC1 | 290..341 | CDD:278826 | 17/98 (17%) | ||
| RCC1 | 345..395 | CDD:278826 | 16/52 (31%) | ||
| RCC1_2 | 386..414 | CDD:290274 | 7/27 (26%) | ||
| RCC1 | 402..449 | CDD:278826 | 16/50 (32%) | ||
| Rpgr | XP_038955861.1 | ATS1 | <78..368 | CDD:227511 | 77/310 (25%) |
| RCC1 | 352..398 | CDD:395335 | 15/45 (33%) | ||
| MDN1 | <625..904 | CDD:227596 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||