DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and Als2

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001013431.1 Gene:Als2 / 363235 RGDID:1310372 Length:1651 Species:Rattus norvegicus


Alignment Length:450 Identity:90/450 - (20%)
Similarity:162/450 - (36%) Gaps:109/450 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KIKEYSPKTTDSHEHRVYVWGFQETGALGLQTNVKKAKERYTEMVHH-PTRLQFSNNNEITDVAA 93
            |:.|:|.|.....|.::              ..|:...|.....:|. ||....:.|:.:...|:
  Rat   345 KLSEHSVKENHEREEKL--------------PQVQPLVEEAVPDLHSPPTTSTSALNSLVVSCAS 395

  Fly    94 GYGFTVYAVNRDDGETLFGSGLNTDSQLGFQ-----VKGNPNDPANLDVIIYPTAIKLPRVQGET 153
            ..|..|.|       |.....|:....:.|.     ..|.|:..|:..    |.::|..|     
  Rat   396 AVGVRVAA-------TYEAGALSLKKVMNFYSTAPCEPGAPSGTASTG----PESLKDLR----- 444

  Fly   154 DEDMRVKSMSAGRAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEE------RYSKSALIHRISQED 212
            :|.::.:|:...::..::                    .|.|||      |.|...|:.::|.. 
  Rat   445 EEQVKQESLQGKKSSSLM--------------------DIREEESEGGSRRLSLPGLLSQVSPR- 488

  Fly   213 ICGKEDEV-------VQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQ---ITLIGGD 267
            :..|...|       .....|:..::..:.:..::|.|.|.:||.|.|:.....|   :..:.| 
  Rat   489 LLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDG- 552

  Fly   268 VEKEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQLDDSELAETQINIPRALKLTKSIGKIKDVA 332
               ::::.|.......|||......:.||::.:|||..||...|   :||..|::...| :..||
  Rat   553 ---KEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTT---VPRLSKVSSESG-VWSVA 610

  Fly   333 AGGSFCMALND-----QGLVYTWGFGILGFGPFVEQTSKPQHLLPPLFGRNDFSNETTVVSIGC- 391
            ||..:.:.|.|     .||.|:      |.....|..:.|::   |       |..||.|.:.| 
  Rat   611 AGHGYSLFLVDTEDFQPGLYYS------GRQDRAEGDTLPEN---P-------SGTTTPVLLSCS 659

  Fly   392 --GVFHMGAVNSDGDLFMWGKNRFGHLGLGHK----KDQFFPFKAAINGKVTKVAYGVDH 445
              |.........|..|.:..||..|::...|:    :.:|:...:.|..::.:....::|
  Rat   660 KLGYISRVTAGKDSYLALVDKNIMGYIASLHELATTERRFYSKLSEIKSQILRPLLSLEH 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335 9/56 (16%)
ATS1 89..449 CDD:444065 78/389 (20%)
Als2NP_001013431.1 ATS1 <18..219 CDD:444065
RCC1 1 59..108
RCC1 2 109..167
RCC1 3 169..218
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..476 7/56 (13%)
RCC1 4 519..570 13/54 (24%)
ATS1 522..>622 CDD:444065 30/107 (28%)
RCC1 5 572..621 17/52 (33%)
RhoGEF 689..873 CDD:470622 3/30 (10%)
PH_alsin 899..1004 CDD:241423
COG4642 <1012..1243 CDD:443680
MORN 1 1043..1065
MORN 2 1066..1088
MORN 3 1094..1116
MORN 4 1117..1139
MORN 5 1145..1167
MORN 6 1169..1191
MORN 7 1192..1214
MORN 8 1215..1238
VPS9 1546..1650 CDD:460489
Blue background indicates that the domain is not in the aligned region.

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