DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and CG9135

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_608985.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster


Alignment Length:393 Identity:89/393 - (22%)
Similarity:152/393 - (38%) Gaps:103/393 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 VNRDDGETLFGSGLNTDSQLGFQVKGNPNDPANLDVIIYPTAIKLPRVQGETDEDMRVKSMSAGR 166
            :|.|  ....|.|.|...|||..        .::.:...||.|  |.:     |.:.:...:.||
  Fly   131 INMD--RKALGFGRNPSGQLGLS--------QDIKLAEKPTII--PAL-----EQLNIVQAAVGR 178

  Fly   167 AHLVVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKSALIHRISQEDICGKEDEVVQVECGQDHSM 231
            .|.:.||..||::..|.|..||||........||.:.:.:|         ...::::.||.:.|:
  Fly   179 HHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYR---------GPPIIRIGCGAEFSV 234

  Fly   232 FLTKKGRIYTCGWGADGQTGQG------------NYH---------------TAGQITLIGGDVE 269
            .|..||.::|.|....||.|..            ::|               ..|.:|.:.|   
  Fly   235 ILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDG--- 296

  Fly   270 KEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQLDDSELAETQINIPRALKLTKSIGK-IKDVAA 333
             .:||..:|.::..:|::.....:.||...:|:|..:|..:..  :||.:|...:.|: .:.|..
  Fly   297 -VQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEM--VPRLMKFFDTQGRGGRSVFC 358

  Fly   334 GGSFCMALNDQGLVYTWGFGILGFGPFVEQTSKPQHLLPPLFGRNDFSNET-------------T 385
            |.:|.:.:|:.||::                         |||:|..:.|.             .
  Fly   359 GSTFSLIVNELGLLF-------------------------LFGQNKKTGEANMYPKPVQDLSGWN 398

  Fly   386 VVSIGCGVFHMGAVNSDGDLFMWGKN-RFGHLGLGH-KKDQFFPFKA--AINGKVTKVAYGVDHT 446
            :..|||....: .:::|..|..||.: .||.||:|. :|....|.:.  ..|.|:.:|..|..||
  Fly   399 ITDIGCANTSI-MISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHT 462

  Fly   447 IAL 449
            :.|
  Fly   463 VLL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335
ATS1 89..449 CDD:444065 88/391 (23%)
CG9135NP_608985.1 ATS1 119..469 CDD:444065 89/393 (23%)
Blue background indicates that the domain is not in the aligned region.

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