Sequence 1: | NP_608550.1 | Gene: | CG3862 / 33261 | FlyBaseID: | FBgn0031286 | Length: | 454 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009301513.1 | Gene: | herc1 / 336598 | ZFINID: | ZDB-GENE-030131-8542 | Length: | 4867 | Species: | Danio rerio |
Alignment Length: | 413 | Identity: | 108/413 - (26%) |
---|---|---|---|
Similarity: | 180/413 - (43%) | Gaps: | 64/413 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 VYVWGFQETGALGLQTNVKKAKERYTEMVHHPTRLQFSNNNEITDVAAGYGFTVYAVNRDDGETL 110
Fly 111 FGSGLNTDSQLGFQVKGNPNDPANLDVIIYP--TAIKLPRVQGETDEDMRVKSMSAGRAHLVVLT 173
Fly 174 QNGTIFTLGNNSYGQCGRSIIEEERYSKSALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKGR 238
Fly 239 IYTCGWGADGQTGQGNYHTAGQITLIGGDVEKEKIVRLSCSSDCVLALNEAGD---AFGWG-NSE 299
Fly 300 YGQLDDSELAETQINIPRALKLTKSIGKIKDVAAGGSFCMALNDQGLVYTWGFG-ILGFGPFVEQ 363
Fly 364 TSKPQHLLPPLFGRNDFSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPF 428
Fly 429 KAAI--NG-KVTKVAYGVDHTIA 448 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG3862 | NP_608550.1 | RCC1 | 43..99 | CDD:278826 | 13/52 (25%) |
RCC1_2 | 159..188 | CDD:290274 | 8/28 (29%) | ||
RCC1 | 175..233 | CDD:278826 | 17/57 (30%) | ||
RCC1_2 | 220..249 | CDD:290274 | 11/28 (39%) | ||
RCC1 | 236..286 | CDD:278826 | 14/49 (29%) | ||
RCC1 | 290..341 | CDD:278826 | 12/54 (22%) | ||
RCC1 | 345..395 | CDD:278826 | 18/50 (36%) | ||
RCC1_2 | 386..414 | CDD:290274 | 10/27 (37%) | ||
RCC1 | 402..449 | CDD:278826 | 13/50 (26%) | ||
herc1 | XP_009301513.1 | RCC1 | 369..726 | CDD:332518 | 107/410 (26%) |
SPRY_HERC1 | 2004..2161 | CDD:293939 | |||
UBA_HERC1 | 2729..2772 | CDD:270584 | |||
WD40 | 3406..3773 | CDD:330360 | |||
WD40 repeat | 3419..3452 | CDD:293791 | |||
WD40 repeat | 3479..3514 | CDD:293791 | |||
WD40 repeat | 3527..3569 | CDD:293791 | |||
WD40 repeat | 3575..3611 | CDD:293791 | |||
WD40 repeat | 3618..3660 | CDD:293791 | |||
WD40 repeat | 3665..3710 | CDD:293791 | |||
WD40 | 3737..>3831 | CDD:330360 | |||
WD40 repeat | 3749..3784 | CDD:293791 | |||
RCC1 | 4004..4351 | CDD:332518 | |||
HECTc | 4479..4847 | CDD:238033 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |