Protein Alignment CG3862 and herc1

DIOPT Version :10

• Sequence 1: NP_608550.1
• Gene: CG3862 / 33261
• FlyBaseID: FBgn0031286
• Length: 454
• Species: Drosophila melanogaster
• Sequence 2: XP_021333508.2
• Gene: herc1 / 336598
• ZFINID: ZDB-GENE-030131-8542
• Length: 4867
• Species: Danio rerio
• Alignment Length: 413
• Identity: 108/413 - (26%)
• Similarity: 180/413 - (43%)
• Gaps: 64/413 - (15%)

  Fly    46 VYVWGFQETGALGLQTNVKKAKERYTEMVHHPTRLQFSNNNEITDVAAGYGFTVYAVNRDDGETL 110
            |||||...:..|     |:..:|:..:....|:   ||   :...:.||. :..:.::.|.....
Zfish   369 VYVWGSNSSHQL-----VEGTQEKILQPKLAPS---FS---DAQTIEAGQ-YCTFVISSDGSVRA 421

  Fly   111 FGSGLNTDSQLGFQVKGNPNDPANLDVIIYP--TAIKLPRVQGETDEDMRVKSMSAGRAHLVVLT 173
            .|.|  :..:||.   |:.|:.:.|..:.:.  .|||            :|.|......|.:..|
Zfish   422 CGKG--SYGRLGL---GDSNNQSTLKKLTFEPHRAIK------------KVSSSKGSDGHTLAFT 469

  Fly   174 QNGTIFTLGNNSYGQCGRSIIEEERYSKSALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKGR 238
            ..|.:|:.|:..||:.|......::|.|      :.|..:.||  .||.|..|..||..:::.|.
Zfish   470 SEGEVFSWGDGDYGKLGHGNSSTQKYPK------LIQGPLQGK--VVVCVSAGYRHSAAVSEDGE 526

  Fly   239 IYTCGWGADGQTGQGNYHTAGQITLIGGDVEKEKIVRLSCSSDCVLALNEAGD---AFGWG-NSE 299
            :||.|.|..|:.|.|:.::....||: .|:  ..:..:||.|...:||::.|.   :||.| |.:
Zfish   527 LYTWGEGDFGRLGHGDSNSRNIPTLV-KDI--SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 588

  Fly   300 YGQLDDSELAETQINIPRALKLTKSIGKIKDVAAGGSFCMALNDQGLVYTWGFG-ILGFGPFVEQ 363
            .|..|.:.:.:     |:.::..:.: .|:.|.||....:||...|.||.||.| .||.|
Zfish   589 LGHGDTNRVYK-----PKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGACLGCG----- 642

  Fly   364 TSKPQHLLPPLFGRNDFSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPF 428
            :|:...|.|.|.   :....|.||.|..|..|..|::.|.:::.||.|..|..|.|:........
Zfish   643 SSEATALRPKLI---EELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 704

  Fly   429 KAAI--NG-KVTKVAYGVDHTIA 448
            |..|  :| .:.:::.|..|::|
Zfish   705 KKVIGLDGVAIQQISAGTSHSLA 727

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3862	NP_608550.1	RCC1	43..99	CDD:395335	13/52 (25%)
		ATS1	89..449	CDD:444065	97/370 (26%)
herc1	XP_021333508.2	None