DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and CG7420

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001259871.1 Gene:CG7420 / 33332 FlyBaseID:FBgn0031344 Length:388 Species:Drosophila melanogaster


Alignment Length:307 Identity:70/307 - (22%)
Similarity:111/307 - (36%) Gaps:75/307 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 IFTLGNNSYGQCGRSIIEE-----ERYSKSALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKG 237
            ::..|.||:||.|.....|     :|.:|.:.           ...:|..:..|..|.:.|...|
  Fly     3 VYAWGANSHGQLGLGFESELCMTPQRVAKCSF-----------APAQVRLIRGGGGHVLILDTSG 56

  Fly   238 RIYTCGWGADGQTGQGN---YHTAGQI--TLIGGDVEKEKIVRLSCSSDCVLALNEAGDAFGWGN 297
            ||:.|||...||.|..:   .|:..::  |...|||..|.|   ||..|...|:......|.||:
  Fly    57 RIHACGWNNRGQLGLDSTEECHSEFKMIPTEYFGDVPVETI---SCGWDISGAITLTKRLFVWGS 118

  Fly   298 SEYGQLDDSELAETQINIPRALKLTKSIGKIKDVAAGGSFCMALNDQGLVYTWG-FGILGFGP-- 359
            :.:.||...:...|.:..|..:||.:. ...:.::.|...|..|.....:|.:| ..|:...|  
  Fly   119 NAFQQLGICQRGFTAVRRPMPVKLPRE-EPAQRISFGLRHCAVLTQDNKIYVFGRLRIMDPPPIE 182

  Fly   360 -------------------------FVEQTSKPQHLL---------------------PPLFGR- 377
                                     .|..:|...|::                     ...||: 
  Fly   183 LDITATCLHRCNTVKIQVHNPNELRIVSISSGQNHMVLKCADLSETGGGSTKRILTLGDNKFGQS 247

  Fly   378 NDFSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQ 424
            |.|..|..|..:..|..|..||..:.::.:||:|.:|.||:|...:|
  Fly   248 NAFQFEEDVRQLAVGWTHNAAVLKNNEILVWGRNCYGQLGMGSFSEQ 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335
ATS1 89..449 CDD:444065 70/307 (23%)
CG7420NP_001259871.1 ATS1 3..348 CDD:444065 70/307 (23%)
Blue background indicates that the domain is not in the aligned region.

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