DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and CG33288

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_996136.2 Gene:CG33288 / 2768968 FlyBaseID:FBgn0053288 Length:1115 Species:Drosophila melanogaster


Alignment Length:328 Identity:71/328 - (21%)
Similarity:127/328 - (38%) Gaps:76/328 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 QTNVKKAKERYTEMVHHPTRLQFSNNNEITDVAAGYGFTVYAVNRDDGETLFGSGLNTDSQLGF- 123
            ::::.:..:.|..:.:.|.:...|..|:            .||..:.|. ||..|.|...|||. 
  Fly    14 KSHLAENTQSYFYIKNDPVKRLISGPNQ------------SAVICESGR-LFVWGENHYGQLGIG 65

  Fly   124 ------QVKGNPNDPANLDVIIYPTAIKLPRVQGETDEDMRVKSMSAGRAHLVVLTQNGTIFTLG 182
                  ..||..:...|.|::..||.:|..:..|     :::..::.|....|:||.:..||.  
  Fly    66 GHGGASGKKGGGSHNGNGDIVTKPTCVKALKTLG-----LKICDVAFGNHWAVMLTHSNEIFF-- 123

  Fly   183 NNSYGQCGRSIIEEERY------------SKSALIH---RISQ-EDICGKEDEV---VQVECGQD 228
                  .||:|..|:.:            ...|:|.   |:.: :|...|.:|.   :.|:.|::
  Fly   124 ------TGRNIFPEDTHVAQHFTSAQVDQQPCAIIRKPFRLEEFDDYLSKNEETDNFMTVQAGKE 182

  Fly   229 HSMFLTKKGRIYTCGWGADGQTG--QGNYHTAGQITLIGGDVE---KEKIVRLSCSSDCVLALNE 288
            |...||..||:..||..|..|.|  :.:|.        |..||   ...:.:.:|..:..|.|..
  Fly   183 HFAVLTTTGRLIGCGSNAQLQLGELEADYD--------GHPVEIRLDAPVQQFTCGPESTLVLTA 239

  Fly   289 AGDAFGWGNSEYGQLDDSELAETQINIPRA-----LKLTKSIGKIKDVAAGGSFCM---ALNDQG 345
            .|:.|..|:  ..:.......|.|.|:|..     :.::|: .::..|...||...   :|.::.
  Fly   240 TGNLFLTGH--LNEFVFPRFTELQKNLPPTEAIIFMHISKT-SEVYIVTNAGSIYRSFESLRNKS 301

  Fly   346 LVY 348
            ||:
  Fly   302 LVF 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335 4/38 (11%)
ATS1 89..449 CDD:444065 67/299 (22%)
CG33288NP_996136.2 ATS1 <30..244 CDD:444065 57/247 (23%)

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