Sequence 1: | NP_608550.1 | Gene: | CG3862 / 33261 | FlyBaseID: | FBgn0031286 | Length: | 454 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006511166.1 | Gene: | Herc1 / 235439 | MGIID: | 2384589 | Length: | 4885 | Species: | Mus musculus |
Alignment Length: | 417 | Identity: | 115/417 - (27%) |
---|---|---|---|
Similarity: | 184/417 - (44%) | Gaps: | 64/417 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 VYVWGFQETGALGLQTNVKKAKERYTEMVHHPTRLQFSNNNEITDVAAGYGFTVYAVNRDDGETL 110
Fly 111 FGSGLNTDSQLGFQVKGNPNDPANLDVIIYPTAIKLPRVQGETDEDMRVKSMSAGRAHLVVLTQN 175
Fly 176 GTIFTLGNNSYGQCGRSIIEEERYSKSALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKGRIY 240
Fly 241 TCGWGADGQTGQGNYHTAG-----QITLIGGDVEKEKIVRLSCSSDCVLALNEAGD-AFGWGNSE 299
Fly 300 YGQLDDSELAETQINIPRALKLTKSIGKIKDVAAGGSFCMALNDQGLVYTWGFG-ILGFGP-FVE 362
Fly 363 QTSKPQHLLPPLFGRNDFSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP 427
Fly 428 -FKAAINGK-VTKVAYGVDHTIALCKP 452 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG3862 | NP_608550.1 | RCC1 | 43..99 | CDD:278826 | 12/52 (23%) |
RCC1_2 | 159..188 | CDD:290274 | 9/28 (32%) | ||
RCC1 | 175..233 | CDD:278826 | 17/57 (30%) | ||
RCC1_2 | 220..249 | CDD:290274 | 12/28 (43%) | ||
RCC1 | 236..286 | CDD:278826 | 14/54 (26%) | ||
RCC1 | 290..341 | CDD:278826 | 15/51 (29%) | ||
RCC1 | 345..395 | CDD:278826 | 12/51 (24%) | ||
RCC1_2 | 386..414 | CDD:290274 | 9/27 (33%) | ||
RCC1 | 402..449 | CDD:278826 | 16/48 (33%) | ||
Herc1 | XP_006511166.1 | ATS1 | 374..731 | CDD:227511 | |
SPRY_HERC1 | 2039..2196 | CDD:293939 | |||
UBA_HERC1 | 2760..2803 | CDD:270584 | |||
WD40 | 3448..3799 | CDD:392136 | |||
WD40 repeat | 3456..3499 | CDD:293791 | |||
WD40 repeat | 3513..3548 | CDD:293791 | |||
WD40 repeat | 3610..3648 | CDD:293791 | |||
WD40 repeat | 3653..3689 | CDD:293791 | |||
WD40 repeat | 3697..3736 | CDD:293791 | |||
WD40 repeat | 3774..3810 | CDD:293791 | |||
ATS1 | 4022..4370 | CDD:227511 | 111/400 (28%) | ||
HECTc | 4497..4865 | CDD:238033 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |