DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and W09G3.7

DIOPT Version :9

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001021671.2 Gene:W09G3.7 / 173245 WormBaseID:WBGene00012370 Length:404 Species:Caenorhabditis elegans


Alignment Length:426 Identity:138/426 - (32%)
Similarity:210/426 - (49%) Gaps:53/426 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KTTDSHEHRVYVWGFQETGALGLQTNVKKAKERYTEMVHHPTRLQFSNNNEITDVAAGYGFTVYA 101
            ||..:.:..||..|...:|||.:...|..:.:........|.|:.:.|...|..:::|:||:::|
 Worm    17 KTRKNVDCAVYGCGLSASGALAIPKLVANSDDVTAGEARFPKRIAYFNTKSIKFISSGFGFSLFA 81

  Fly   102 -VNRDDGETLFGSGLNTDSQLGFQVKGNPNDPANLDVIIYPTAIKLPRVQGETDEDMRVKSMSAG 165
             .||     |:|:|:|...|:|.|:   .|.....|..|....|.:|     .||   :..:|:|
 Worm    82 SKNR-----LYGAGINNRFQIGGQL---TNINKYQDYYISAKKINIP-----GDE---ILEISSG 130

  Fly   166 RAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKSALIHRISQEDICGKEDE----------- 219
            |||.::.|..| :|.:|:|::|||||: .|...|             :.|.|:.           
 Worm   131 RAHSLIRTNLG-VFAIGDNNFGQCGRN-PENMDY-------------VVGSEESPLLPLSFPTSE 180

  Fly   220 -VVQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQITLIGGDVEKEKIVRLSCSSDCV 283
             ::.:.|..|.|..:...|.:::.|...|||.|...|....:...:.||||..||.::|.|:|.:
 Worm   181 PIISIHCSMDTSFVVDSSGAVFSFGLNEDGQCGNEAYGIQWEPAKVRGDVEGSKIQKVSGSTDTL 245

  Fly   284 LALNEAGDAFGWGNSEYGQLDDSELAETQINIPRALKLTKSIGKIKDVAAGGSFCMALNDQGLVY 348
            ||.:|.|:.|.||.:||||...: ..|.|:|..|  .:..|:|.|..|.:..|..:|.|.:|.|:
 Worm   246 LACSENGEIFIWGQTEYGQAAGA-TDEIQLNTSR--HVANSLGPIICVDSTQSSVVARNSRGNVF 307

  Fly   349 TWGFGILGFGPFVEQTSKPQHLLPPLFGRNDFSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRF 413
            .||.|:||.||..|....|..:..|||      :...|.|:..|...|.|:|.||.||:||:||:
 Worm   308 VWGVGVLGMGPEAESLKTPTQMDQPLF------DGKMVTSVSAGNSCMSAINEDGRLFIWGENRY 366

  Fly   414 GHLGLGHKKDQFFPFKAAINGKVTKVAYGVDHTIAL 449
            ..|||||:|.|.||::..:.|.|.|.|.|.||::.|
 Worm   367 SSLGLGHQKRQLFPYQLFLPGDVRKAALGPDHSLFL 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:278826 14/55 (25%)
RCC1_2 159..188 CDD:290274 10/28 (36%)
RCC1 175..233 CDD:278826 16/69 (23%)
RCC1_2 220..249 CDD:290274 6/28 (21%)
RCC1 236..286 CDD:278826 17/49 (35%)
RCC1 290..341 CDD:278826 17/50 (34%)
RCC1 345..395 CDD:278826 17/49 (35%)
RCC1_2 386..414 CDD:290274 14/27 (52%)
RCC1 402..449 CDD:278826 24/46 (52%)
W09G3.7NP_001021671.2 ATS1 <108..347 CDD:227511 83/270 (31%)
RCC1 142..195 CDD:278826 15/66 (23%)
RCC1 198..239 CDD:278826 13/40 (33%)
RCC1 355..402 CDD:278826 24/46 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166308
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H36477
Inparanoid 1 1.050 205 1.000 Inparanoid score I2436
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45758
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 1 1.000 - - FOG0007486
OrthoInspector 1 1.000 - - oto19777
orthoMCL 1 0.900 - - OOG6_106330
Panther 1 1.100 - - LDO PTHR46337
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3252
SonicParanoid 1 1.000 - - X5611
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.940

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