DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3862 and ca

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_061499486.1 Gene:ca / 1274071 VectorBaseID:AGAMI1_011079 Length:2093 Species:Anopheles gambiae


Alignment Length:483 Identity:107/483 - (22%)
Similarity:160/483 - (33%) Gaps:151/483 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VYVWGFQETGALGLQTNVKKAKERYTEMVHHPTRLQFSNNNEITDVAAGYGFTVYAVNRDDGETL 110
            :|..|....|.||:..:|..|.:        |..::..:...||..|||........|    ..|
Mosquito  1237 LYSMGANNLGQLGIGNHVINALQ--------PMLVKTLDGKSITHFAAGQYHNAVVAN----GLL 1289

  Fly   111 FGSGLNTDSQLGFQVKGNPNDPANLDVIIYPTAIKLPRVQGETDEDMRVKSMSAGRAHLVVLTQ- 174
            :..|.....|||   .|..|| .|...|:            |...:.::..::.|.||.:||.: 
Mosquito  1290 YTWGWGVFGQLG---HGTVND-CNKPKIV------------EFFRNKKILQIALGHAHTMVLCRG 1338

  Fly   175 ----NGTIFTLGNNSYGQCGR------SIIEEERYSKSALIHRISQ-----EDICGKEDEVVQVE 224
                :.:::..|:|.|||.|.      .:..:.|..||.||..:.:     |:||     |:..:
Mosquito  1339 EHETHSSLYVFGSNHYGQLGLGQEDPFGVTVDTRNGKSFLISLVPRKVHLNEEIC-----VINTK 1398

  Fly   225 CGQDHSMFLTKKGRIYTCGWGADGQ----------------TGQ-GNY----------------- 255
            ...  ::.||...::||  ||:..|                ||: |:|                 
Mosquito  1399 LFV--NLVLTTSNKLYT--WGSSPQALRLATQARKRAKSSNTGKGGSYSKFSSILRSGSKYNGTE 1459

  Fly   256 HTAGQI----------------------TLIGGDVEK----EKIVRLSCSSDCVLALNEAGDAFG 294
            ||....                      |..|.:..|    |:....|..||...|..::.||  
Mosquito  1460 HTTSAAESSPSETKTPQSTEETDKDETETTTGEESSKQEDTERQTNTSDPSDEESAAGQSTDA-- 1522

  Fly   295 WGNSEYGQLDDSELAETQINIPRALKLTKSIGKIKDVAAGGSFCMALNDQGLVYTWGFGILGFGP 359
                             .|.||. :|:|      .|..||.....|.|:.....|...|      
Mosquito  1523 -----------------SIIIPE-IKIT------DDGPAGNEKLQAGNEADEKATTNSG------ 1557

  Fly   360 FVEQTSKPQHLLPPLFGRNDFSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGL-GHKKD 423
               .....:||. |||...... |..:|.|..|::|...|..||.::.||||....||. |.:.:
Mosquito  1558 ---GDDAMEHLF-PLFVDTSLV-EGRIVKISSGLYHFAIVTEDGSIYTWGKNIERQLGREGGRNE 1617

  Fly   424 QFFPFKAAINGKVTKVAYGVDHTIALCK 451
            ...|.:......|..|..|.|.|:.:.|
Mosquito  1618 VLIPTRLETVDNVEHVECGADFTLIMTK 1645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335 13/52 (25%)
ATS1 89..449 CDD:444065 97/436 (22%)
caXP_061499486.1 None

Return to query results.
Submit another query.