DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and LOC1269407

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_308044.2 Gene:LOC1269407 / 1269407 VectorBaseID:AGAMI1_014054 Length:474 Species:Anopheles gambiae


Alignment Length:388 Identity:98/388 - (25%)
Similarity:157/388 - (40%) Gaps:101/388 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 IYPTAIKLPRVQGETDEDMRVKSMSA--GRAHLVVLTQNGTIFTLGNNSYGQCGR-SIIEEERYS 200
            |.|......|..|||     .:||::  ..||.|::.:|...||.|.|...|.|. ..:..|:.:
Mosquito    91 IRPNLFTFHRFTGET-----YRSMASFCSAAHSVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPT 150

  Fly   201 KSALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGN-YHTAGQITLI 264
            :.|        |:.  :..|:|..||::|::|||..|.:|.||....||.|.|| ..|....|.|
Mosquito   151 QVA--------DLA--DFNVIQAACGRNHTLFLTDTGTVYACGDNKSGQCGVGNKLPTITSPTRI 205

  Fly   265 GGDVEKEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQL----------DDSELA---ETQINIP 316
              ......|:::.|.::..:.|:..|:...:|..|||||          :.::::   |||   |
Mosquito   206 --SYNGPPIIKVGCGAEFSVILDIKGNLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQ---P 265

  Fly   317 RALKLTKSIGK-----------IKDVAAGGSFCMALNDQGLVYTWGFGILGFGPFVEQTSKPQHL 370
            |.:.:.....|           |.|.|.|.:..:|::.:...|:||||.:|.....||..:   :
Mosquito   266 RKVLVYMEKNKEGHVLPIENVNIIDFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDE---M 327

  Fly   371 LPP--------------------------------LFGRNDFSNET-------------TVVSIG 390
            :|.                                |||:|..:.|.             .:.|||
Mosquito   328 VPRLIKFFDTQNRKVMRVFCGSSYSLAISDIGSLYLFGQNKKTGEANMYPKPVQDLAGWNITSIG 392

  Fly   391 CGVFHMGAVNSDGDLFMWGKN-RFGHLGLGH-KKDQFFPFKAA-ING-KVTKVAYGVDHTIAL 449
            .|...: .:::|..|..||.: .:|.||||. :|....|.:.. :.| |:..||.|..|::.|
Mosquito   393 TGYTSI-VISADDSLIAWGASPTYGELGLGDLQKSSSTPKEVTRMEGMKIPMVALGYSHSMLL 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335
ATS1 89..449 CDD:444065 97/386 (25%)
LOC1269407XP_308044.2 ATS1 115..457 CDD:444065 90/359 (25%)
Blue background indicates that the domain is not in the aligned region.

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