DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and RCC1

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001041659.1 Gene:RCC1 / 1104 HGNCID:1913 Length:452 Species:Homo sapiens


Alignment Length:455 Identity:115/455 - (25%)
Similarity:178/455 - (39%) Gaps:92/455 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KIKEYSPKTTDSHEHRVYVWGFQETGALGLQTNVKKAKERYTEMVHHPTRLQFSNNNEITDVAAG 94
            |.:..|.::..:....|...|..:.|.|||..||.:.|:  ..:|..|        .::....||
Human    52 KTRPVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKK--PALVSIP--------EDVVQAEAG 106

  Fly    95 YGFTVYAVNRDDGETLFGSGLNTDSQLG--FQVKGNPNDPANLDVIIYPTAIKLPRVQGETDEDM 157
               .::.|.......::..|.|.:..||  ..|:|:                  ..|.|:.:...
Human   107 ---GMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGS------------------EMVPGKVELQE 150

  Fly   158 RVKSMSAGRAHLVVLTQNGTIFTLGN--NSYGQCGRSIIEEERYSKSALIHRISQEDICGKEDEV 220
            :|..:|||.:|...||.:|.:|..|:  ::.|..|  ::|.   .|.:::....|.|:     .|
Human   151 KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG--LLEP---MKKSMVPVQVQLDV-----PV 205

  Fly   221 VQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQITLIGGDVEKEKI------------ 273
            |:|..|.||.:.||..|.:||.|.|..||.|:.....|.:    ||....|::            
Human   206 VKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANR----GGRQGLERLLVPKCVMLKSRG 266

  Fly   274 ----VRLS---CSSDCVLALNEAGDAFGWGNSEYGQL--DDSELAETQINIPRALKLTKS-IGKI 328
                ||..   |.:....|::..|..:|:|.|.|.||  ..:|......|:......||| :|  
Human   267 SRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVG-- 329

  Fly   329 KDVAAGGSFCMALNDQGLVYTWG---FGILGFGPFVEQTSKPQHLLPPLFGRNDFSNETTVVSIG 390
              .:.|....:.::.:|..|:.|   :|.||.|...|:.|     :|.|..|     ...|.|:.
Human   330 --FSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKS-----IPTLISR-----LPAVSSVA 382

  Fly   391 CGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPF----KAAINGKVTKVAYGVDHTIALCK 451
            ||.....||..||.:|.||......||.|..:|.:.|.    |...|..|..|:.|..||:.|.|
Human   383 CGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVK 447

  Fly   452  451
            Human   448  447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335 13/55 (24%)
ATS1 89..449 CDD:444065 100/392 (26%)
RCC1NP_001041659.1 ATS1 60..420 CDD:444065 103/418 (25%)

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