DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and Rcc2

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_776292.1 Gene:Rcc2 / 108911 MGIID:1919784 Length:520 Species:Mus musculus


Alignment Length:379 Identity:92/379 - (24%)
Similarity:151/379 - (39%) Gaps:109/379 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 MRVKSMSAG--RAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKSALIHRISQEDICGKEDE 219
            :||:::.:|  .||.:::|..|.:::.|.|..||.|..  :.:|.....||..:|.|       .
Mouse   146 VRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHG--DTKRVEAPRLIEALSHE-------A 201

  Fly   220 VVQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTA----GQITLIGGDVEKEKIVRLSCSS 280
            :|...||::|::.||..|.::..|....||.|.||...|    .||...|     :.|.:::|.:
Mouse   202 IVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNG-----QPITKMACGA 261

  Fly   281 DCVLALNEAGDAFGWGNSEYGQLD----------------DSELAETQINIPRALKLTKSIGKI- 328
            :..:.::..|:.:.:|..|||||.                |.||...::.|  .::.||. |:| 
Mouse   262 EFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAI--FIEKTKD-GQIL 323

  Fly   329 -------KDVAAGGSFCMALNDQGLVYTWGFGILGFGPFVEQTSKPQHLLPPLFGRNDFSNE-TT 385
                   :|||.|.:..:.|:.|..|::||||  |:|.......|.: ::|.|....||... .|
Mouse   324 PVPNVVVRDVACGANHTLVLDSQKRVFSWGFG--GYGRLGHAEQKDE-MVPRLVKLFDFPGRGAT 385

  Fly   386 VVSIG--C--------GVFHMGAVN---------------------------------SDGDLFM 407
            .:..|  |        |:|..||.|                                 :|.....
Mouse   386 QIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTIS 450

  Fly   408 WGKN-RFGHLGLGHKKDQFFPFKAAINGKVTK---------VAYGVDHTIALCK 451
            ||.: .||.||.|..|.     |::...:..|         ||.|..|::.:.:
Mouse   451 WGPSPTFGELGYGDHKP-----KSSTAAQEVKTLDGIFSEQVAMGYSHSLVIAR 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335
ATS1 89..449 CDD:444065 92/375 (25%)
Rcc2NP_776292.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..78
RCC1 1 101..163 5/16 (31%)
ATS1 149..500 CDD:444065 90/376 (24%)
RCC1 2 166..217 16/59 (27%)
RCC1 3 219..269 13/54 (24%)
RCC1 4 271..345 20/76 (26%)
Required for interaction with RAC1. /evidence=ECO:0000250|UniProtKB:Q9P258 316..323 3/7 (43%)
RCC1 5 346..399 16/55 (29%)
RCC1 6 401..445 5/43 (12%)
RCC1 7 446..499 14/57 (25%)
Blue background indicates that the domain is not in the aligned region.

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