DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3862 and Rcc1

DIOPT Version :10

Sequence 1:NP_608550.1 Gene:CG3862 / 33261 FlyBaseID:FBgn0031286 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001184011.1 Gene:Rcc1 / 100088 MGIID:1913989 Length:434 Species:Mus musculus


Alignment Length:478 Identity:120/478 - (25%)
Similarity:183/478 - (38%) Gaps:100/478 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 AKRGVLAQD---KSK----IKEYSPKTTDSH-EHR--------VYVWGFQETGALGLQTNVKKAK 67
            |||....:|   |||    .:...|.|.... .||        |...|..:.|.|||..:|.:.|
Mouse     7 AKRRSPPEDAIPKSKKVKDTRNRGPATRSCQVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERK 71

  Fly    68 ERYTEMVHHPTRLQFSNNNEITDVAAGYGFTVYAVNRDDGETLFGSGLNTDSQLG--FQVKGNPN 130
            :        |..:..     :.||.......::.|.......::..|.|.:..||  ..|:|:  
Mouse    72 K--------PALVPL-----LQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGS-- 121

  Fly   131 DPANLDVIIYPTAIKLPRVQGETDEDMRVKSMSAGRAHLVVLTQNGTIFTLGN--NSYGQCGRSI 193
                            ..|.|:.:...:|..:|||.:|...||::|.:|..|:  ::.|..|  :
Mouse   122 ----------------EMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG--L 168

  Fly   194 IEEERYSKSALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKGRIYTCGWGADGQTG------- 251
            :|.   .|.:::....|.|.     .||:|..|.||.:.||..|.:||.|.|..||.|       
Mouse   169 LEP---MKKSMVPVQVQLDA-----PVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFA 225

  Fly   252 -QGNYHTAGQITLIGGDVEKEKIVR-------LSCSSDCVLALNEAGDAFGWGNSEYGQLDDSEL 308
             :|.....|::.:....:.|.:..|       ..|.:....|::..|..:|:|.|.|.||.....
Mouse   226 NRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGT 290

  Fly   309 AETQI--NIPRALKLTKS-IGKIKDVAAGGSFCMALNDQGLVYTWG---FGILGFGPFVEQTSKP 367
            ....|  |:......||| :|    .:.|....:.::.:|..|:.|   :|.||.|...|:.|  
Mouse   291 GSCFIPQNLTSFKNSTKSWVG----FSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKS-- 349

  Fly   368 QHLLPPLFGRNDFSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPF---- 428
               :|.|..|     ...|.|:.||.....||:.||.:|.||......||.|..:|.:.|.    
Mouse   350 ---IPTLISR-----LPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTG 406

  Fly   429 KAAINGKVTKVAYGVDHTIALCK 451
            |...|..|..|:.|..||:.|.|
Mouse   407 KQLENRVVLTVSSGGQHTVLLVK 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3862NP_608550.1 RCC1 43..99 CDD:395335 13/63 (21%)
ATS1 89..449 CDD:444065 98/388 (25%)
Rcc1NP_001184011.1 ATS1 45..402 CDD:444065 99/411 (24%)

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