DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3662 and itm2a

DIOPT Version :10

Sequence 1:NP_608549.2 Gene:CG3662 / 33260 FlyBaseID:FBgn0031285 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001004833.1 Gene:itm2a / 448099 XenbaseID:XB-GENE-1008613 Length:247 Species:Xenopus tropicalis


Alignment Length:250 Identity:60/250 - (24%)
Similarity:101/250 - (40%) Gaps:58/250 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VAYSDNEADAESMVFNRPQHHCIKSFLLFLIAVVVMLLG-VLGGWTLYRVYAPSHS----SMRY- 97
            ||.:|.|..|:..  ......|    ||.|:.:..:|.| ::||..:|:.:.|..:    .|.| 
 Frog    23 VAETDTEVAAQGT--ENSTGRC----LLTLLGLAFILAGLIVGGACIYKYFMPRRNIYEGVMSYS 81

  Fly    98 --HALCEIPYPEDSMEMARVYPRTVEPFALNWRSLLPELAQPMPNSGSLDESHFREDIELDGDSD 160
              |.|.|.||          |                     :|.|   :|:..|||       |
 Frog    82 EQHDLGEEPY----------Y---------------------LPVS---EEADIRED-------D 105

  Fly   161 DEGYARVDVPDFKDGRRGRFMHDFKENQSAIIDTTTGRCFIMPLDRDTTLPPTSFVDLIKKMSTG 225
            :.....|.||.|.:......:|||....:|.:|....:|:::.|:....:||.:.:||..|::.|
 Frog   106 NVALITVPVPSFSESDPAAILHDFDRLLTAYLDLQLQKCYVIDLNTSIVMPPRNLLDLFIKLADG 170

  Fly   226 YYNIDTERVRRQMRVVMPRITDVSLISERIANECFDMKVYMMEK--FVSGVSKRS 278
            .:...|..|:..: :|..:|.|:|.:...|...|...:.|.:.:  .:.|:.|||
 Frog   171 SFLPQTYLVQEDL-IVSEKIDDLSELGIFIYQHCVGRETYRLVRRDQIIGLQKRS 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3662NP_608549.2 BRICHOS 172..267 CDD:198107 23/94 (24%)
itm2aNP_001004833.1 BRICHOS 117..211 CDD:198107 23/94 (24%)

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