DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3662 and Itm2c

DIOPT Version :10

Sequence 1:NP_608549.2 Gene:CG3662 / 33260 FlyBaseID:FBgn0031285 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001009674.1 Gene:Itm2c / 301575 RGDID:1309503 Length:269 Species:Rattus norvegicus


Alignment Length:244 Identity:54/244 - (22%)
Similarity:93/244 - (38%) Gaps:61/244 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 RPQHH-----------CIKSFLLFLIAVVVMLLG-VLGGWTLYRVYAPSHSSMRYHALCEIPYPE 107
            ||..|           |..|     :.:||:|:| |.....:||.:..:..:......|.:.| |
  Rat    45 RPPRHRSRKGGSVGGVCYLS-----MGMVVLLMGLVFASVYIYRYFFLAQLARDNFFHCGVLY-E 103

  Fly   108 DSMEMARVYPRTVEPFALNWRSLLPELAQPMPNSGSLDESHFREDIELDGDSD---DEGYARVD- 168
            ||:                                   .|..|..:||:.|..   :|.|.|:: 
  Rat   104 DSL-----------------------------------SSQIRTRLELEEDVKIYLEENYERINV 133

  Fly   169 -VPDFKDGRRGRFMHDFKENQSAIIDTTTGRCFIMPLDRDTTLPPTSFVDLIKKMSTGYYNIDTE 232
             ||.|..|.....:|||:...:|..|.:..:|:::.|:....|||.:|.:|:..:..|.|...|.
  Rat   134 PVPQFGGGDPADIIHDFQRGLTAYHDISLDKCYVIELNTTIVLPPRNFWELLMNVKRGTYLPQTY 198

  Fly   233 RVRRQMRVVMPRITDVSLISERIANECFDMKVYMMEKFVS--GVSKRSA 279
            .::.:| ||...:.|...:...|.:.|.....|.:.:..:  .::||.|
  Rat   199 IIQEEM-VVTEHVRDKEALGSFIYHLCNGKDTYRLRRRATRRRINKRGA 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3662NP_608549.2 BRICHOS 172..267 CDD:198107 24/94 (26%)
Itm2cNP_001009674.1 BRICHOS 138..230 CDD:198107 23/92 (25%)

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