Protein Alignment Clp and YTH1

DIOPT Version :10

• Sequence 1: NP_477156.1
• Gene: Clp / 33259
• FlyBaseID: FBgn0015621
• Length: 296
• Species: Drosophila melanogaster
• Sequence 2: NP_015432.1
• Gene: YTH1 / 856222
• SGDID: S000006311
• Length: 208
• Species: Saccharomyces cerevisiae
• Alignment Length: 185
• Identity: 73/185 - (39%)
• Similarity: 102/185 - (55%)
• Gaps: 23/185 - (12%)

  Fly     1 MDILLANVSGLQFKAERDLIEQVGAIPLPFYGMDKSIA-----AVCNFI-TRNG-QECDKGSACP 58
            |.::..:.:...||.|            ||...:.|.:     .:|.|. :|.| :.|.:|..||
Yeast     1 MSLIHPDTAKYPFKFE------------PFLRQEYSFSLDPDRPICEFYNSREGPKSCPRGPLCP 53

  Fly    59 FRHIRG--DRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNAC-HNKECPFLHIDPQ 120
            .:|:..  ...|||:|||||||||.||||:||||::.|||||.|:|:...| .:.:|.:|||||.
Yeast    54 KKHVLPIFQNKIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDCQYLHIDPA 118

  Fly   121 SKVKDCPWYKRGFCRHGPHCRHQHLRRVLCMDYLAGFCPEG-PSCKHMHPHFELP 174
            ||:..|..|:.|||..|..|..:|:::|.|..|:.||||.| ..|...||.|.:|
Yeast   119 SKIPKCENYEMGFCPLGSSCPRRHIKKVFCQRYMTGFCPLGKDECDMEHPQFIIP 173

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Clp	NP_477156.1	YTH1	12..175	CDD:227416	72/174 (41%)
YTH1	NP_015432.1	YTH1	2..208	CDD:227416	72/184 (39%)