DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clp and ZC3H8

DIOPT Version :9

Sequence 1:NP_477156.1 Gene:Clp / 33259 FlyBaseID:FBgn0015621 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_115883.2 Gene:ZC3H8 / 84524 HGNCID:30941 Length:291 Species:Homo sapiens


Alignment Length:138 Identity:37/138 - (26%)
Similarity:53/138 - (38%) Gaps:43/138 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKDCPWYKRGF 133
            :||::|...|.|||||:|.|:.::.|..|.                           |.:|.:|:
Human   196 ICKYFLERKCIKGDQCKFDHDAEIEKKKEM---------------------------CKFYVQGY 233

  Fly   134 CRHGPHCRHQHLRRVLCMDYLAGF-CPEGPSCKHMHPHFELPPLAELGKDQLHKKLPTCHYCGEL 197
            |..|.:|.:.| ....|..|..|. |.:|..||..|     .||....::.|.|.|.|       
Human   234 CTRGENCLYLH-NEYPCKFYHTGTKCYQGEYCKFSH-----APLTPETQELLAKVLDT------- 285

  Fly   198 GHKANSCK 205
              :..|||
Human   286 --EKKSCK 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClpNP_477156.1 YTH1 12..175 CDD:227416 28/106 (26%)
ZnF_C3H1 66..90 CDD:214632 11/20 (55%)
ZC3H8NP_115883.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..75
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..179
ZnF_C3H1 <226..246 CDD:214632 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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