Protein Alignment Clp and EMB1789

DIOPT Version :10

• Sequence 1: NP_477156.1
• Gene: Clp / 33259
• FlyBaseID: FBgn0015621
• Length: 296
• Species: Drosophila melanogaster
• Sequence 2: NP_200503.1
• Gene: EMB1789 / 835795
• AraportID: AT5G56930
• Length: 675
• Species: Arabidopsis thaliana
• Alignment Length: 240
• Identity: 51/240 - (21%)
• Similarity: 84/240 - (35%)
• Gaps: 82/240 - (34%)

  Fly    70 CKHWLRGLCKKGDQCEFLHE-YDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKDCPWYKRGF 133
            |:|:|:|.|.:||:|:|.|: ...||...|.:::..:.....:|||.|  ..||.....:..:||
plant   356 CRHYLKGRCHEGDKCKFSHDTIPETKCSPCCYFATQSCMKGDDCPFDH--DLSKYPCNNFITKGF 418

  Fly   134 CRHGPHCRHQH------------------LRRVLCMDYLAGFCPEGPSCKHMHPHFELPPLAELG 180
            |..|..|...|                  ..::..    |.|.|:....:.:
plant   419 CYRGDSCLFSHKGTPQSASDTPSANVTVSSTKITA----ASFSPQKTKKQSV------------- 466

  Fly   181 KDQLHKKLPTCHYCGELGHKANSCKQYVGSLEHRNNINAMDHSGGHSGGYSGHSGHIEGADDMQS 245
            :|.: .|||.      :..:.:|...::....|.|..|:.|                  |...:.
plant   467 RDAI-AKLPA------IQARVSSSVAFLKPSSHSNQRNSSD------------------ASSSKI 506

  Fly   246 NHHSQPHGPGFVKVPTPLEEITCYKCGNKGHYANKCPKGHLAFLS 290
            |.|..|     .:|| ||.:            .:..||| ::|||
plant   507 NEHVTP-----PQVP-PLRK------------PSVAPKG-MSFLS 532

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Clp	NP_477156.1	YTH1	12..175	CDD:227416	28/123 (23%)
EMB1789	NP_200503.1	YTH1	<345..466	CDD:227416	28/115 (24%)
		zf_CCCH_4	356..374	CDD:465719	9/17 (53%)