Protein Alignment Clp and CPSF4L

DIOPT Version :9

• Sequence 1: NP_477156.1
• Gene: Clp / 33259
• FlyBaseID: FBgn0015621
• Length: 296
• Species: Drosophila melanogaster
• Sequence 2: XP_011523417.1
• Gene: CPSF4L / 642843
• HGNCID: 33632
• Length: 190
• Species: Homo sapiens
• Alignment Length: 168
• Identity: 96/168 - (57%)
• Similarity: 125/168 - (74%)
• Gaps: 2/168 - (1%)

  Fly     1 MDILLANVSGLQFKAERDLIEQVGAIPLPFYGMDKSIAAVCNFITRNGQECDKGSACPFRHIRGD 65
            |..::|.:....|..|:|:..|.|...|||.|||||.:|||||.|:.  .|:||..|||||.||:
Human    23 MQEVIAGLERFTFAFEKDVEMQKGTGLLPFQGMDKSASAVCNFFTKG--LCEKGKLCPFRHDRGE 85

  Fly    66 RTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKDCPWYK 130
            :.:||||||||||||||.|:|||:||:|:||||||||:|..|.||||.|||:.|..|.:|||||.
Human    86 KMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECSFLHVKPAFKSQDCPWYD 150

  Fly   131 RGFCRHGPHCRHQHLRRVLCMDYLAGFCPEGPSCKHMH 168
            :|||:.||.|:::|:.|::|::||.|||||||.|:..|
Human   151 QGFCKDGPLCKYRHVPRIMCLNYLVGFCPEGPKCQFAH 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Clp	NP_477156.1	YTH1	12..175	CDD:227416	94/157 (60%)
		ZnF_C3H1	66..90	CDD:214632	18/23 (78%)
CPSF4L	XP_011523417.1	YTH1	34..>182	CDD:227416	90/149 (60%)
		ZnF_C3H1	85..108	CDD:214632	16/22 (73%)
		ZnF_C3H1	141..166	CDD:214632	13/24 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	76	1.000	Domainoid score	I9043
eggNOG	1	0.900	-	-		E1_COG5084
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1472764at2759
OrthoFinder	1	1.000	-	-		FOG0002750
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23102
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X2133
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
User_Submission	0	0.000	Not matched by this tool.
	8	7.880