Protein Alignment Clp and Cpsf4l

DIOPT Version :9

• Sequence 1: NP_477156.1
• Gene: Clp / 33259
• FlyBaseID: FBgn0015621
• Length: 296
• Species: Drosophila melanogaster
• Sequence 2: XP_030101983.1
• Gene: Cpsf4l / 52670
• MGIID: 1277182
• Length: 295
• Species: Mus musculus
• Alignment Length: 222
• Identity: 89/222 - (40%)
• Similarity: 120/222 - (54%)
• Gaps: 56/222 - (25%)

  Fly     1 MDILLANVSGLQFKAERDLIEQVGAIPLPFYGMD------------------------------- 34
            |:.::|.:.|..|..|.|:..|.|...|||.|||
Mouse     1 MEEVIAGLQGFTFAFELDVESQKGTGLLPFQGMDSEWRCLCPLLRSWRCCASLPHSFWVFTARDR 65

  Fly    35 ----------------------KSIAAVCNFITRNGQECDKGSACPFRHIRGDRTIVCKHWLRGL 77
                                  :|.:|||||..:.  .|.||..||.||.:|::.:|||||||||
Mouse    66 KADFRAARAPWVPPKPSTSCLRESSSAVCNFFAKG--LCVKGMLCPLRHEQGEKLVVCKHWLRGL 128

  Fly    78 CKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKDCPWYKRGFCRH-GPHCR 141
            |:|.|.|:|||:||::|||.|||:|:|..|.||||.|||:.|..|::|||||.:|||:. ||.|:
Mouse   129 CRKSDCCDFLHQYDVSKMPVCYFHSKFGNCSNKECLFLHLKPVLKLQDCPWYNQGFCKEVGPLCK 193

  Fly   142 HQHLRRVLCMDYLAGFCPEGPSCKHMH 168
            ::|:.:|||.:|..|||||||.|:..|
Mouse   194 YRHVHQVLCPNYFTGFCPEGPQCQFGH 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Clp	NP_477156.1	YTH1	12..175	CDD:227416	86/211 (41%)
		ZnF_C3H1	66..90	CDD:214632	16/23 (70%)
Cpsf4l	XP_030101983.1	YTH1	<84..>215	CDD:227416	72/132 (55%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	113	1.000	Domainoid score	I6143
eggNOG	1	0.900	-	-		E1_COG5084
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1472764at2759
OrthoFinder	1	1.000	-	-		FOG0002750
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23102
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X2133
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	8	7.880