DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clp and ZC3H4

DIOPT Version :10

Sequence 1:NP_477156.1 Gene:Clp / 33259 FlyBaseID:FBgn0015621 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_055983.1 Gene:ZC3H4 / 23211 HGNCID:17808 Length:1303 Species:Homo sapiens


Alignment Length:292 Identity:60/292 - (20%)
Similarity:90/292 - (30%) Gaps:116/292 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 HIRGDR--TIVCKHWLRGLCKKGDQCEFLHEYDMTKMPE-CYFYSRFNACHNKECPFLHIDPQSK 122
            |.:.|:  .::||:::.|.|..||.|.|.|:.::.|..| |.||........:.||::|.|...|
Human   385 HQQSDKKGKVICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCK 449

  Fly   123 VKDCPWYKRGFCRHGPHCRHQH----------LRRVLCMDYLAGF-------------------- 157
            :    ::..|.|.:|..|...|          |.::|..|..||.                    
Human   450 L----YHTTGNCINGDDCMFSHDPLTEETRELLDKMLADDAEAGAEDEKEVEELKKQGINPLPKP 510

  Fly   158 ---------------------------------------CPEGPSCKHMHPHFELPPLAELGKDQ 183
                                                   .|.||....|..|..|.|.....:|.
Human   511 PPGVGLLPTPPRPPGPQAPTSPNGRPMQGGPPPPPPPPPPPPGPPQMPMPVHEPLSPQQLQQQDM 575

  Fly   184 LHKKLPT-----CHYCGELGHKANSCKQYVGSLEHRNNINAMDHSGGHSG--------GYSGHSG 235
            .:||:|:     ....|:|..|..  .::.|             .||..|        |..|..|
Human   576 YNKKIPSLFEIVVRPTGQLAEKLG--VRFPG-------------PGGPPGPMGPGPNMGPPGPMG 625

  Fly   236 -----------HIEGADDMQSNHHS-QPHGPG 255
                       |.:...||.::.|: .|.|||
Human   626 GPMHPDMHPDMHPDMHPDMHADMHADMPMGPG 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClpNP_477156.1 YTH1 12..175 CDD:227416 37/185 (20%)
ZC3H4NP_055983.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..388 1/2 (50%)
zf-CCCH_4 394..415 CDD:465626 8/20 (40%)
ZnF_C3H1 421..445 CDD:214632 7/23 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 486..571 9/84 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 605..685 14/53 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 710..955
PHA03247 <897..1123 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 996..1288
PRK07003 <1046..>1285 CDD:235906
Blue background indicates that the domain is not in the aligned region.

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