DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGAP2 and pgap2

DIOPT Version :10

Sequence 1:NP_608548.1 Gene:PGAP2 / 33258 FlyBaseID:FBgn0031284 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001428921.1 Gene:pgap2 / 541417 ZFINID:ZDB-GENE-050320-119 Length:254 Species:Danio rerio


Alignment Length:245 Identity:98/245 - (40%)
Similarity:142/245 - (57%) Gaps:7/245 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DPKSVLFRLPFARLALVALSLPLGGFFFCVIWSLTFDFVRSTYTHCDVTNYLPSVSAAIGNYEPQ 74
            |....|.|:||.|||::.:.|||.|...|::.::.:.:..:|||||.|.|||||:|||| :..|:
Zfish    10 DRDKPLIRVPFTRLAVITVCLPLLGLVACIVLAMLYHYNDATYTHCQVPNYLPSISAAI-SLTPE 73

  Fly    75 KTVWRLAIFLHLPLRLAVAKIYLEHYREHIRR--SRRLLGILACFLNVVEDLALFCLSFWTSADH 137
            :.:||.:|.||...|..||..||..||....|  :.:||......|.:.|::.|..|::.:|.:.
Zfish    74 RYIWRFSIGLHSAPRFLVAAAYLSFYRGRFSRRLTEQLLSGFTFLLALSENVGLLLLTYVSSTET 138

  Fly   138 YETHRNAFVVFIACSECYMLVSYLLNRNIQKTVLLPHEEKSLRYKRNLFLVNVIAFGLAGYCFVR 202
            |..|::.|::||..|..:||.:..|...|.|..:...|..|..:|..|||.|.....||.|.:.|
Zfish   139 YSVHKSGFILFIGSSLFHMLCTCKLWSLIVKYSISSEEMMSYWFKLRLFLFNGGCCVLAVYFYRR 203

  Fly   203 HNSHCEAGVYTFFALFEYIVVLTNMGFHMTSYWDFYALNVVC----DAKH 248
            ||::||.|:||.||:.||:|||:||.||||:||||....|:.    :.||
Zfish   204 HNTYCEEGIYTCFAVCEYLVVLSNMAFHMTAYWDFGGKEVMVATPPEGKH 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGAP2NP_608548.1 Frag1 19..240 CDD:431193 92/222 (41%)
pgap2NP_001428921.1 None

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